CI01000050_07307744_07309403


Basic Information

Item Value
gene id CI01000050_07307744_07309403
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 7307411 ~ 7310537 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_07307744_07309403.mRNA
AGAGAGCGAGTGAATCAACGGTTTCACTTTCAGTTAATCTCCGAAAAGGACGGGTGAGAGTACTGGCTGTTTATGTGAGCAGCCGGTTCACTACAGTCACTCCAGATACTGTGAACAGCAAAACAGAAGTGCCGCACTGCCTGCACAAACAGCGCGACGCGCAATGTTTTTAGACTAGTTGAAGGCAGGTACAACACACAGCAACGTTACATCAGCGTTCGTTCCTCAAGTCTATGTAAACATGTGACTGGTTCGTGACGGGCTCTAGTTCACCTGCACAAGGCTCCAGAATGCGAACAATTCTGGTGGAAAAGGGGTATCAGCGTCCTCCTGATACTGCCACTGTGTGCAAGCATCAACCACACCCTCAGAGCGGACATTTTCAAACGGTTGTCTCCTGAAAAAGCATATTATATATATATATAAAATGTTTATGATCCGCGGGTCAGGCCAAGTAATAAAAAAATAACATTCCAATTAATTGCGGGTGGATGAGTGATAAATCATTAATGTGTTGATTTTAATAAAGACACGGAACTCTCATTTCACGTCAAGATGCAATGAACGTGCGTCACTCTTTTACTTTCGTTTTCGTAACTGAACGTCTCTTTAGAGAAAACCAATCAAGGAAAGCATGTGCCAGCACCTCCTAGTGGTCATTATATAAAACACAAAGGAAAACCCTACATGAGATATTGCTTTATAAAGTAACAGCTTTAACTAAAAATATATACAAGCTTAACTAAGAGTAATTATATAATTATATATATATATATATAGGCTAATTATATGTCCAACAATGATGTAAGAAAACAGTGACAAAATTTAAGTTTGAAGGGAGTAAAGCCTGTGTTTAAAGGCTGTTAAGGAAATGTAATTTAGCCAAATAAGAGCTTTAATTTTAAATAAATGTTAATTTATAAGCAGACTTTTTTATTCCTTTGTGCAGTGCAGATTTTTTTGAGGTATCGAAAAAGGTATCGTTCAGGAATCGGTATCGATATTGAACATTTTTGAACAATACCCAGCCCTACTTCTGATACTACTAAAAGAAGTCTGGGAAGGAGACTATGGTAAGAGTGAGCCTACTAAGATTGTGTCTTCTGTTTTGCAAATGAGGGACATCTGGAGAAAATGAGGGTATTGGCCCAAACTCACCTGACCAAGACCCAGAGGGACCAAAAGGCATGGTATGACCAAAAAGCGCTTGTGATGCTGCCGAGCCAGGAGAATAAGCTGTTGGCCAAGTGCAAGGGCCCCTTTAAGATCAAGAACCAAACAGGCCCCACTACGTTTGAAGTGGCCACTCCAGGGCAAGATCGAGCTAGTCGAATACTTCACGTAAATCTTTTAAACAAGAGTAAGAGGAATGGGAAGAACCAAACTTGTCTCAACCAGTATCTGGAGGTATCAATCTGGAGCATCTGCCTGAAGATCAGCAATCCCAGTCCAGACTTTGCTCAAGAATTTATCGTCCAGGCGGATGCCTCTGAGAGGGGCATAGAGGCTGTGCTGCTACAAGGACCTCCAGGTGAGCGACAGAGAGTGGCTTTCATCAGCCGCAAACTTTTTCCACGTGAAGTTCGTTATTCTACAATCAACAAAGAATGTTTGGCAGTTAAATGGGCCCTGGACTCCTTGAGATATTACCTATTGGGTAGGAAGTTTAAATTAGAAACGGACCATAAACCTCTCCAGTGGTTGGAAAGGATGAAAGATGCCAACGGGAGAATCACACGGTGGTATGTGACTACGCAGCCTTTCCAGTTTACAGTCCAGCATGTTTCCGGAAAGTACAATGTGACTGACGACTACTTATCTCATTGTACCAATGAGATTCCTGAAGGGAGGGGGTGTATGATGGCCGAACCTGTGGCCACATATTGATAAGGGTAACTCCACATTCACAATGCATACATTCACCCTCGCTAACATTTCCTTATACATTCCTTCACATATTTATCGAGTCATTTTTTGTACTCTTTATCTACCCTTTAAAGGTGCAGTATGTAAAATTTGGGAGGATCTATTTACAGAAATGCAATATAATATACATAACTATGTCACTCTACAGAGTGTGTTTCGTCACTAAGTTGTTCTTCTAAATCGTTACCAATCGTTACTCGCTGATACCAACTAGAAGCCACGTCATGGGGGGAGGGGGAGGTGATGGGAATGGAATTTGATTTTGATTGGTTTTCACTTATTTTAATTATTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_07307744_07309403.mRNA True 2220 mRNA 0.41 3 7307411 7310537

Neighbor

gene id symbol gene type direction distance location
CI01000050_07239689_07244721 NA coding downstream 62690 7239615 ~ 7244721 (-)
CI01000050_07207399_07217984 OGG1 coding downstream 89427 7207175 ~ 7217984 (-)
CI01000050_07155856_07157697 NA coding downstream 149714 7154965 ~ 7157697 (-)
CI01000050_07047887_07057166 TAS1R2.2 coding downstream 249997 7047552 ~ 7057414 (-)
CI01000050_07037053_07037750 HER3 coding downstream 269597 7036592 ~ 7037814 (-)
CI01000050_07338022_07340567 ANGPTL7 coding upstream 26908 7337445 ~ 7341011 (-)
G216882 NA non-coding downstream 92424 7184655 ~ 7214987 (-)
G216879 NA non-coding downstream 133661 7168326 ~ 7173750 (-)
G216935 NA non-coding downstream 139358 7167835 ~ 7168053 (-)
G216930 NA non-coding downstream 149236 7157750 ~ 7158175 (-)
G216986 NA non-coding upstream 39336 7349873 ~ 7351492 (-)
G217012 NA non-coding upstream 91936 7402473 ~ 7460138 (-)
G217033 NA non-coding upstream 128287 7438824 ~ 7439461 (-)
G217050 NA non-coding upstream 179600 7490137 ~ 7494279 (-)
G216878 NA non-coding upstream 202826 7513363 ~ 7513944 (-)
G216931 NA other downstream 142010 7164095 ~ 7165401 (-)
G216408 NA other downstream 950900 6356017 ~ 6356511 (-)
G216093 NA other downstream 1755308 5489557 ~ 5552103 (-)
G215935 NA other downstream 2234302 5048916 ~ 5073109 (-)
CI01000050_04564233_04580815 KANSL3 other downstream 2694519 4563687 ~ 4581278 (-)

Expression


Co-expression Network