CI01000050_07338022_07340567 (ANGPTL7)


Basic Information

Item Value
gene id CI01000050_07338022_07340567
gene name ANGPTL7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 7337445 ~ 7341011 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_07338022_07340567.mRNA
ATTGTGAGGTGCATTGCACATGTTTTGACGTGTGGGACCAGACAAAAGGCGGAGGAAAATTTTTTGCAAGGGGGAGAGGGTGAGGAGGGCCGAGTGGTGGTAGGTGGTGGGGGGGTCAATGACTGTGGGCCTGACCAAAAGGGGAGGGCACAGCACACGTGAAAAAAATATTTAAGGCCCTCGGTGTGAGCAGACATCTGATTCTGAACAGCAGAGAATAGAGACCTGCCCGGAAAATTTTCTACACTTCATTCTAAAGAGTTCTTACATTTTTCTTGTGCCACTGTCATCTGACAAACATTCGACAGAGCAACACAGCCAAGATCGATCAGCATCTTCCTCAAAGCAAGATTACTCAAACTTTCTCAGCACATAAGAATAACGAAAAGCATGAAGATGATGGCTACAGCATTGGCTCTTTTACTTCTAGTCCTTGGTCACACAATGGCTCAGAGTGGCGTCAAGAAGAACTTGGCAACACCCAAACAGGCCAAACCAGCACAATGCTGTGATGAGGTGCGCTCCTTGAAGGTCCAGGTGGCGAATTTGACCAGCATGTTGGAAGAAATTAACAAGAAGCAGGAGTCTGATCTCATGAAGACCATGCGGCAAATGATCAAGCTGGAAAAGCTTAACCAGCAGCAAGAGGCCCGTGTCACAGAGGCAGAGAGCAAGTATTCAGAAATCTACAATCAGATTGAAATCATGCAGCTGCAGGCAGCCCAGTCTGCCCCACAGCAGAGCACTTCAGATGCAATCTATGATTGCGCATCCCTATACAACAAAAACTATAAAATTTCTGGAGAGTATAAATTACCAAAAGATGAATTCCTTGGAACACCTGAACTAAATGTATATTGTGACATGGAAAACAATGGCGGTGGCTGGACTGTCATTCAGAGACGCAAGATTGGTCTGACAAGCTTCAACCGTGACTGGAAGCAGTACAAGAATGGTTTTGGTACAATCCGTGGTGACTTCTGGCTCGGCAACGAACACATCTTCCGTCTGACCAGACAGCCCACAGTGCTGAGAATAGAGATGGAGGCAAGTGGATACTGGTACAACTGCTGCACTGACTCCAATCTTAATGGTGTGTTTCACCGCTATGGGTCACATACCAAGAATCCAGATGGCATCTCTTGGTATGGATGGCATGGACCAAACTACTCACTGAAACGGGTAGAAATGAAGATTCGACCCCAGAGCTTTGTACCTTAAAGACTTGCCAAAACCAAATTTATGTTCCTGCTCACCACTAAACCTTGGATCAACATATTCTACAGCTTAAACTGGGCAAACATTTCAGGGGGAATGCATTTGTAAAAGTGTTTTAAGATATATGTGATAAACGATGTTTGATTGTAAATTGCATTTTATACAAGGTATTTATCTCTTAAATATTTTATTTTCTTTAGCCTTTTCTAGATGATTTTATGCACATGATTATTGAGTACAGCAAGACTAAGCAACAAGCTGATGTAAGCCATTCACACAATATGTTCAATTTTGTAAAATTACAAACAATTTGACAGTTCAGAGACATTACGGTAAGTTCACTGGTACAGTAAAATGAACTCTGTAAAAAGTAAAATATTGGATGATTAATAAATTGTATTTTTAAAAAAAATAATTTTTGCTTTACCTAAATTATGTGTCTGCTTTGGTGCAAAATGAACTAAAACAGTCAAAATGAGTGTGTGACAAACATGAAAGAAAAAAAAAATGAAATACACAAAACATTACGAAACAACAGTGAGACTGAAAAATCCATCAAGAAACAACCACAGATATTAAA

Function

symbol description
angptl7 Predicted to enable signaling receptor binding activity. Predicted to be involved in angiogenesis. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including chordo neural hinge; fin; median fin fold; musculature system; and pectoral fin bud. Orthologous to human ANGPTL7 (angiopoietin like 7).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_07338022_07340567.mRNA True 1798 mRNA 0.41 4 7337445 7341011

Neighbor

gene id symbol gene type direction distance location
CI01000050_07307744_07309403 NA coding downstream 26908 7307411 ~ 7310537 (-)
CI01000050_07239689_07244721 NA coding downstream 92724 7239615 ~ 7244721 (-)
CI01000050_07207399_07217984 OGG1 coding downstream 119461 7207175 ~ 7217984 (-)
CI01000050_07155856_07157697 NA coding downstream 179748 7154965 ~ 7157697 (-)
CI01000050_07047887_07057166 TAS1R2.2 coding downstream 280031 7047552 ~ 7057414 (-)
G216882 NA non-coding downstream 122458 7184655 ~ 7214987 (-)
G216879 NA non-coding downstream 163695 7168326 ~ 7173750 (-)
G216935 NA non-coding downstream 169392 7167835 ~ 7168053 (-)
G216930 NA non-coding downstream 179270 7157750 ~ 7158175 (-)
G216986 NA non-coding upstream 8862 7349873 ~ 7351492 (-)
G217012 NA non-coding upstream 61462 7402473 ~ 7460138 (-)
G217033 NA non-coding upstream 97813 7438824 ~ 7439461 (-)
G217050 NA non-coding upstream 149126 7490137 ~ 7494279 (-)
G216878 NA non-coding upstream 172352 7513363 ~ 7513944 (-)
G216931 NA other downstream 172044 7164095 ~ 7165401 (-)
G216408 NA other downstream 980934 6356017 ~ 6356511 (-)
G216093 NA other downstream 1785342 5489557 ~ 5552103 (-)
G215935 NA other downstream 2264336 5048916 ~ 5073109 (-)
CI01000050_04564233_04580815 KANSL3 other downstream 2724553 4563687 ~ 4581278 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035961 angptl7 coding NC_007119.7 CM002892.2 46217861 ~ 46221296 (+)
bowfin (Amia calva) AMCG00002250 NA coding CM030136.1 CM030136.1 9055314 ~ 9061095 (-)