XLOC_009627



Basic Information


Item Value
gene id XLOC_009627
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 3136158 ~ 3137243 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021672
gtttttggactgtgggggaaaccggagcacccagaggaaacccacgcgaatgctgggagaacatgcaaattccacacagaaacgccaactgagccgaggttcgaaccagcaaccttcctgctgtgagatgacagcactacctactgcgccaccgcatcgcctggAGAAATTCAGGCTTTTCAGGTGGAGATGTTCGTCTGGAGTGGTGTGAGGCTGGCATTGAGGAAGCAGAGCCTGCTTTAATTAATCAAAGACATAAAAACCCTATTGTGAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021672 True 274 lncRNA 0.51 2 3136158 3137243

Neighbor


gene id symbol gene type direction distance location
XLOC_009626 cyb5r4 coding upstream 39413 3067134 ~ 3096745 (+)
XLOC_009625 NA coding upstream 77067 3053424 ~ 3059091 (+)
XLOC_009624 CABZ01043952.1 coding upstream 108918 3004422 ~ 3027240 (+)
XLOC_009623 lars2 coding upstream 145482 2899611 ~ 2990676 (+)
XLOC_009622 clec3ba coding upstream 291963 2840775 ~ 2844195 (+)
XLOC_009628 NA coding downstream 10019 3147262 ~ 3149817 (+)
XLOC_009629 NA coding downstream 45506 3182749 ~ 3192150 (+)
XLOC_009630 wdr21 coding downstream 48298 3185541 ~ 3189799 (+)
XLOC_009631 CABZ01052320.1 coding downstream 216258 3353501 ~ 3353617 (+)
XLOC_009632 NA coding downstream 320972 3458215 ~ 3461793 (+)
XLOC_009620 CU896588.1 non-coding upstream 406669 2729373 ~ 2729489 (+)
XLOC_009616 LO017875.1 non-coding upstream 851984 2284056 ~ 2284174 (+)
XLOC_009615 NA non-coding upstream 960107 2121671 ~ 2176051 (+)
XLOC_009614 NA non-coding upstream 1274998 1860384 ~ 1861160 (+)
XLOC_009633 NA non-coding downstream 454168 3591411 ~ 3593405 (+)
XLOC_009613 NA non-coding upstream 1030602 1776515 ~ 2105556 (+)

Expression



Co-expression Network