G216882


Basic Information

Item Value
gene id G216882
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 7184655 ~ 7214987 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU246028
GATTAAGTAAGACAATTATGGCTATTACTAATAAACTTAAATCAATATGAAATACAAAAGTAGCTATAAATAATGTTCAGTATAAACACTCTTAAAATGTTTGACTGTTAGTTTTCTATATGAAGTAGATTTTTTTTGTAATCACTGTTTTAAGTTATTGGGTGCTTTCATATTGTCTACATAACACAACTCGCCTCTTAGACAGCAAATACAGCTATGATCCAGATATGCAGCTAAAGTTAACAATGGTGTCTGCAGAGGAGCTAATGGACTACCATTTAAAAAGCTAGCAAAATTGAATTAAGTCCTTAATTAAGCTAAATTCAATTTAACCAATAAACATATTTAATTCATTTAAACTGAACTCATCCATGGCGACTCTGCTACTTTTACATATAGCTATACAAAAATGTATATGCATTTGCATGTTAACATACAGGTGCATCTCAAAAAATATGAATATCTTGTAAAATTTAATGTTTTTTTTGTAATTTAATTCAAAAAGTAAAACTTTCATATATTCCACATTCATTAGACATAAACTAAAATATATCAAGCCTTTTTCTGTAGCCTAAGCCATAATCATTTTGATGATTATGACTTATGCCGGGTTCAGACTACACAATATTTTTGTCCGTTGCGATAGTCGCTGTGTCAGATTATAAGATTTTGACTCCTAAAATCTTGTCGAGTTGTGGACAAGAAACGTGTCAGACTACACGTTGCTACCCGATCATTCAATGCTTGTCGTCTTTAACCATGTGCATGCTGTCATCGAGAAGGCGGGACTATTGACTGACAGAAGGTGCCGTGAGCGTAAAAAAACAATGGCTAGCAGTGTTTTGCTCTGTCTTGTCCAAAAGTGCACACATATCTGGATTGCATGGATATTTGGATTTCCTCCAAAAAGAACTGAGGTAACATATGTTTAATTTACCTTTGTTCACTCTGTCGTGGTAGTCCCTTGAGGAAACCCTTGTCCCTTGTTGTCATCCACTATGACACACTACACAAGCTGAAACGATCGAATCTTGCTTCCCGACGCCCATTGTCGTTTACGAATCCCCACGACACTCTACTTCAAGTAGATCGTGGCAAAATGTGGCTAAAATCATGTAGTCTGAACTGGGCATTAGGCTACAGCTCATAAAAATAAAACATCCAGTATCTCAAGTTATTAGAATATTTCCTAAGATCAAAAAAGTATTTACAATACAAAAAAAAATTCAAGTTCTGAACTTGGTCAGGGCTCATTTAGCACGAATTACTGCATCAATGCGGCGTGGCATTGAGGCGATCAGCCTGTGGTACTGCTGAGGTGTTATTGAAGCAGAGATCGTATTACTATAGGGAGATAAGAGGGTCTGTATCTCTTACCATTGGAGAAGGTGTAACGGCTAACTTAATCACACGCGGCACTTCTCAGCCTGTCATGTCGCCGTTCAAAACTCCACCCTGCATACCGCCAATGCGTACCACCCCGTACCGCCAGTTAGCATTAGCCATTATGCTTTTTTGGCTAAAGGTTGCAGGCTTGCCTTCCAGTGGCTTTGATTGAAGCCCAGGTTGCTTTGAAGCCCAGGTTGCTTTGATGGCAGCTGTCAGCTTATCTGTATTGTTGGGTCAGGTGTTTGTCATCTTCCTCTTGACAATACCCCATAAATTCTCTATGGGGTTCAGGTCAGGTGAGTTGTCTGGCCAATCATCACAGTAATATCATGGCGAGCAAACCAGTTAGTAGTAGTTTTGGCACTGTGGGCAGGTGCTAAGTCCTGCTGGAAAAAGAAATCAGCATCACTATAAAGCTTGTCATCAGACGTAAGCATGAAGTACTCTAAAATCTCCTGGTAGATGACTTTTTTGACTTTGGACTTGATGAAACACAGTGGACCAACACCAGCAGATGACATGGCACCCCAAAACATCATTGACTGTGGAAACTTCACATTGGACTTCAAGCAAGTTGGATTCTGTGCCTCTCCACTCTTCCTCCAGACTCTATGACCTTGATTTTCAAATGAAATGCAAAATTTACTTTCATCTGAAAAGAGGTCTTTGGACCACTGAGCTATAGTCCAGTTATTTTTCTCCTTAGCTCAGGTAAGACGCTTCTGACATTGTCTCTGGTTCAGGATTGGCTTTGTACGAGGAATGTGGCAGTTGTAGCCCATTTCCCGAAGACATCTGTGTGTGGTGGTTCTTGATTCACTGACTCCTGCTTCAGTCCATTCCTAGTGAAGCTCTTCCAAGTTTCTGAATCGGCCATCCCTGTTGCTTGTGCACCTTTTCCTGCCACACTTTTTCCTTACAGTCAACTTTCCATGAATATGCTTTGATATGCATGGCTCTGCGAACAGCCAGCCCTTTCAGCGATGACCTTTTGTGGCTTACCCTCTATTGTGGAGGGTGTTGATGATGGCTTTCTGGACAACTGTCAAATCATCAGATTTCCACATGATTGTGGTTGAGAGTACTGAACTAGGCTGAGAGATACCAGGTATTAAAGGGTTAGTTCACCCAAAAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246028 True 2526 lncRNA 0.40 2 7184655 7214987

Neighbor

gene id symbol gene type direction distance location
CI01000050_07155856_07157697 NA coding downstream 26958 7154965 ~ 7157697 (-)
CI01000050_07047887_07057166 TAS1R2.2 coding downstream 127241 7047552 ~ 7057414 (-)
CI01000050_07037053_07037750 HER3 coding downstream 146841 7036592 ~ 7037814 (-)
CI01000050_07030874_07033872 NA coding downstream 150783 7030635 ~ 7033872 (-)
CI01000050_06949824_06962679 NA coding downstream 221009 6949347 ~ 6963646 (-)
CI01000050_07239689_07244721 NA coding upstream 24628 7239615 ~ 7244721 (-)
CI01000050_07307744_07309403 NA coding upstream 92424 7307411 ~ 7310537 (-)
CI01000050_07338022_07340567 ANGPTL7 coding upstream 122458 7337445 ~ 7341011 (-)
G216879 NA non-coding downstream 10905 7168326 ~ 7173750 (-)
G216935 NA non-coding downstream 16602 7167835 ~ 7168053 (-)
G216930 NA non-coding downstream 26480 7157750 ~ 7158175 (-)
G216927 NA non-coding downstream 34750 7149521 ~ 7149905 (-)
G216986 NA non-coding upstream 134886 7349873 ~ 7351492 (-)
G217012 NA non-coding upstream 187486 7402473 ~ 7460138 (-)
G217033 NA non-coding upstream 223837 7438824 ~ 7439461 (-)
G217050 NA non-coding upstream 275150 7490137 ~ 7494279 (-)
G216878 NA non-coding upstream 298376 7513363 ~ 7513944 (-)
G216931 NA other downstream 19254 7164095 ~ 7165401 (-)
G216408 NA other downstream 828144 6356017 ~ 6356511 (-)
G216093 NA other downstream 1632552 5489557 ~ 5552103 (-)
G215935 NA other downstream 2111546 5048916 ~ 5073109 (-)
CI01000050_04564233_04580815 KANSL3 other downstream 2571763 4563687 ~ 4581278 (-)

Expression


Co-expression Network