G216878


Basic Information

Item Value
gene id G216878
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 7513363 ~ 7513944 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU246024
ATGAAGATAAAATAGGTTTCATTTTCTATATGAATGATATCTCTTATTTTTCTTTAATTCTTTATTTATTTATTTATTTTTGGTGATATTTGACCTTGTACAGCTTGTACAAATCATTTCAAGTAACATGAAGCACTGACAATGTTATAGCCATATAACACAACCTCATCCAAGATTAATTCTTCAGATTTTTCAGGGGTTTGCTTAGAAAAGTGACTGCTTCACTTTTCAAAATTGTACTAGTAAAGAAATGCTCACATTTTTTCAAATCAATGTCAATTTTCAAAGTCTGTGCTTGCATCACTCTCCTAAGTGAATTTAAGGGCAAAATACAGAAAAGGAAAGCAGTAGCAATATGAAGCTCTACCAAAAAGGGCAACCATCCAATGTAACACTGGCACAGATTTTCATGCGAAGTAGCTTGTTTGATGAGCAGCTCCACTTGA

Function

NR:

description
PREDICTED: probable tRNA pseudouridine synthase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246024 True 446 lncRNA 0.33 2 7513363 7513944

Neighbor

gene id symbol gene type direction distance location
CI01000050_07338022_07340567 ANGPTL7 coding downstream 172352 7337445 ~ 7341011 (-)
CI01000050_07307744_07309403 NA coding downstream 202826 7307411 ~ 7310537 (-)
CI01000050_07239689_07244721 NA coding downstream 268642 7239615 ~ 7244721 (-)
CI01000050_07207399_07217984 OGG1 coding downstream 295379 7207175 ~ 7217984 (-)
CI01000050_07155856_07157697 NA coding downstream 355666 7154965 ~ 7157697 (-)
G217050 NA non-coding downstream 19084 7490137 ~ 7494279 (-)
G217012 NA non-coding downstream 53225 7402473 ~ 7460138 (-)
G217033 NA non-coding downstream 73902 7438824 ~ 7439461 (-)
G216986 NA non-coding downstream 161871 7349873 ~ 7351492 (-)
G216882 NA non-coding downstream 298376 7184655 ~ 7214987 (-)
G217065 NA non-coding upstream 18542 7532486 ~ 7532699 (-)
G216931 NA other downstream 347962 7164095 ~ 7165401 (-)
G216408 NA other downstream 1156852 6356017 ~ 6356511 (-)
G216093 NA other downstream 1961260 5489557 ~ 5552103 (-)
G215935 NA other downstream 2440254 5048916 ~ 5073109 (-)
CI01000050_04564233_04580815 KANSL3 other downstream 2900471 4563687 ~ 4581278 (-)

Expression


Co-expression Network