CI01000051_00083434_00086769


Basic Information

Item Value
gene id CI01000051_00083434_00086769
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 82720 ~ 87359 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_00083434_00086769.mRNA
AGTTTATTTTAGCAATAAACATTACATAAAATAAGGTTAGCCTACTAATTTAGTTAATTTAGAAAATTAATTCAATTTTCTAGTAATTTGTTTATTAGCCCAAATTAGCCTATACCGCCACAGAACACCATAGTTTGGAACCATGTTGTTTTGTAATTAAGAATAAACTTATAATTCCCATAAATGAAAGAAAAATATTTAGATCGGGTCCATAATGTTATTTCAGTTTTTTTTTTTTTTTTTTTTTAGAATTTTACCTCTAAGATGGGACAGTCCAAAATCCCCGTTTAAGGGGGAGATATTTATTGTATTAATGTATTTAAAACTACTTACATTTTATACTAGGTTATTTTATGTTAGATAATAGTTAATTAACCATATATTAATTAATTAACAGGGAATGTATGCCTGTACTGATTTAAAAATAAGTTATCCGTATTTGTGGAATGTGCTTTTTAATAACCAAACTGAATAAACGTAGGCTAGATTGGCTGAACTAATATTGGAGGTATTGCGACAAGGATCTAGATCACTCAAACAAAGTCGATTGTGTAAAAACACCTGTGTTTCGTCTCTATCGAAATTTCACAATGAGAAATGCAAAATATTTGCGCCGCCTGGTTGTCATGAAGGGTGTCGCGGCCTTTGGACGTCACATGATCATCGTGTCACATGACTTTGTTTTTGGCGAAAATGACAACTGGCGTTACAACATATGCGCACTAAATGCAATATCTAAACTGTTTTTACACAGAGATCTCTCCAACAACCCCATCTCCAATCTGAGCGATTTCATATTTGAGGGTTTCAGCCATCTTACCCAACTTTTACTACCCTCAAAACTGGAGTGTCCGGGGGGCAATGCATCATGGGAGAAGGTTGAAGTGAAAAACAAAGCCAGGATCTGCGAAGGACAGAAAAACATTTGCAATCAGACGGTGCAGATGCCCTGGAATTGCCCTGAAAACTCATTCTGCAGCCCATATGGACCAGGGTTCTTTGAGTGCAGTTGTCTCCATAATTTCCACGGATACAAATGCATGAGACAGGGAGACTTTCCCTTAATTAAGGTGCTTGGGATACTCACCGGATTCACAGTTGTGGTTTCATCTTTACTCTGGTTCACACAAAGACGAAAGGTTGAGAACACTTGAATTTAAAAGAGAAGCGGCTGCTGGAGTGACAGTGGAGCACATGCCACAAAATGCATCGAGTTTACTGAAAATGATGCAAGAGATTCATACACTGGAAGGTTAATGAACATTTTAGTTTCTTGTTTTTTAAACTTGACAAAAGCAAGTTTACATGACATTCTTTTTTTAATAACTTTCACTTTGTTTTGACCCTTAAATCTTTTTATTTATAGATTTTATAAAATGAAAACTGACATGTTTTCACAGTCTTGAAAAGACTGCTGTGTAAAGGGAAAACTGACCATAGACTGACCTTGCTGATTGCCACATTTCTGACAGATGTTTTGACTCTAAGCACTGAGATATTTTAGTAATGGCTATGAAGAACAAATATTTTGTGTTGCTTTAAGACAAAATTGTCTTCATTTTAAAGATATTTGAAGTGTTTTCATTTTATAAGGGAGGGAAATGAATGTCACTTGTGATTTGTGAAAAAAATGTATATTGTTATTGCCACATCCAGCTGTTTACAGACGTCACATGTTCGATACTAACCGATGACCATGCAACCTCTATATGCTTTTATTTTTTTGTTAGAGTAAAGGGAATCTGTTTCATCTGCTAATATGACACTATTAGTATAATACTGACATAAGTTACTTTATGCAAATCTCAGTTTTGTCAATGTAGTGTTGTGGTAAGGAATTCAGCATGTACCTCAGAACCTAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_00083434_00086769.mRNA True 1868 mRNA 0.35 5 82720 87359

Neighbor

gene id symbol gene type direction distance location
CI01000051_00036318_00057051 SCARA5 coding downstream 25669 36318 ~ 57051 (-)
CI01000051_00000977_00002147 NA coding downstream 80181 810 ~ 2539 (-)
CI01000051_00131867_00138611 ZNF513 coding upstream 43213 130386 ~ 138790 (-)
CI01000051_00224709_00227613 NA coding upstream 137148 224507 ~ 227613 (-)
CI01000051_00262483_00263385 BLK coding upstream 175082 262441 ~ 263385 (-)
CI01000051_00278614_00302552 NA coding upstream 190833 278192 ~ 304373 (-)
CI01000051_00334616_00337009 SOX7 coding upstream 246694 334053 ~ 337197 (-)
G217426 NA non-coding downstream 5433 73998 ~ 77287 (-)
G217453 NA non-coding downstream 11200 70343 ~ 71520 (-)
G217399 NA non-coding downstream 63358 18604 ~ 19362 (-)
G217430 NA non-coding upstream 41255 128614 ~ 128880 (-)
G217411 NA non-coding upstream 41753 129112 ~ 129592 (-)
G217468 NA non-coding upstream 54146 141505 ~ 141743 (-)
G217425 NA non-coding upstream 70598 157957 ~ 160923 (-)
CI01000051_00394082_00407612 MTMR9 other upstream 307872 392720 ~ 407612 (-)
CI01000051_00560810_00563417 NA other upstream 474837 560768 ~ 563417 (-)
CI01000051_01785489_01787612 IGFBP1A other upstream 1621939 1784416 ~ 1787760 (-)

Expression


Co-expression Network