CI01000051_00224709_00227613



Basic Information


Item Value
gene id CI01000051_00224709_00227613
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 224507 ~ 227613 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000051_00224709_00227613.mRNA
ACCGTCCACCCGCTCCGGTTAATGTGTCGGTCATGCACCTGAGAGCTGATTCAGCAACCGTGTCCTGGGAGGTGCCCGAGGGTGACATCATCATTGGCTTTTCCATCTCCCAACAGAGAATGGACGGCAAAATGCAGAGGTTTATCAGAGAGGTGAACACCACCAGCAGATCCTGTGTGCTGTGGGATCTGGAGGAGGAGACGGACTACATCATCCAGGTTCAGTCCATCGGCCTGTACGGAGAGAGTCAGGCCAGCAAACGTGTCCATTTTAGAACCCTGAAGAAAACTGACCGTTTCCCCTCGAACAGTTCAAACCAAGCTCCAATTTCTAATCAGCTCGCTGCCTCTCAGGGGGATATGCTGTATATTTGGCGCTGTGCGGCACGAGCGGATGATCCCTAATAGCAGTCCCTAATAGCAATGTTGTGTTGATACGAGATGTTTTTGAGAGATTTTCTCTTCTTTATGAAATCTAGCACAGCATTGAAAACCAGATAAATCAAGCTGCCTTCAACATGAGAGTAGCTATTTTTGCCAGACATGTTGAGAGCAACAAAACATCCAGGCTTGTGCACACCAACGCAGATGGAGCGCTCGAAATTAA

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000051_00224709_00227613.mRNA False 606 mRNA 0.49 3 224507 227613

Neighbor


gene id symbol gene type direction distance location
CI01000051_00131867_00138611 ZNF513 coding downstream 85717 130386 ~ 138790 (-)
CI01000051_00083434_00086769 NA coding downstream 137148 82720 ~ 87359 (-)
CI01000051_00036318_00057051 SCARA5 coding downstream 167456 36318 ~ 57051 (-)
CI01000051_00000977_00002147 NA coding downstream 221968 810 ~ 2539 (-)
CI01000051_00262483_00263385 BLK coding upstream 34828 262441 ~ 263385 (-)
CI01000051_00278614_00302552 NA coding upstream 50579 278192 ~ 304373 (-)
CI01000051_00334616_00337009 SOX7 coding upstream 106440 334053 ~ 337197 (-)
CI01000051_00346827_00352024 NA coding upstream 119214 346827 ~ 352381 (-)
CI01000051_00357855_00378052 NA coding upstream 129221 356834 ~ 378052 (-)
G217417 NA non-coding downstream 6352 216869 ~ 218155 (-)
G217420 NA non-coding downstream 7740 215484 ~ 216767 (-)
G217419 NA non-coding downstream 9383 214080 ~ 215124 (-)
G217424 NA non-coding downstream 10655 213614 ~ 213852 (-)
G217423 NA non-coding downstream 11137 211892 ~ 213370 (-)
G217553 NA non-coding upstream 70437 298050 ~ 298268 (-)
CI01000051_00394082_00407612 MTMR9 non-coding upstream 165107 392720 ~ 407612 (-)
G217532 NA non-coding upstream 169405 397018 ~ 397424 (-)
G217531 NA non-coding upstream 186233 413846 ~ 414972 (-)
G217573 NA non-coding upstream 200411 428024 ~ 428243 (-)
CI01000051_00560810_00563417 NA other upstream 334583 560768 ~ 563417 (-)
CI01000051_01785489_01787612 IGFBP1A other upstream 1481685 1784416 ~ 1787760 (-)
G218728 NA other upstream 2299730 2527343 ~ 2546459 (-)

Expression



Co-expression Network