CI01000051_00346827_00352024


Basic Information

Item Value
gene id CI01000051_00346827_00352024
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 346827 ~ 352381 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_00346827_00352024.mRNA
AGTCTTTAATCCCTGGACACTAGAAGTTCTCATTGCTGACGCAGCATTTGCAGTGCTAAACCAGCGTAGTCAGAGCGCCGTGTCTCTGTGCTGGGAGGAATATTACTTTTGTGTTATAAATTAGGGACTCTCTGACATAGCACAGAGTGGGACAAATTAGTTGCAGTTTTCAGCAGCAAATTCAAGAGTGTTGTCACGATTTTGGTTTTTTTGGTTTGTGAAACACATTCAGAGGCATTTCGACAACTTTTTTTTTTTTTTTCTCCACCACCCCTGGCTGCTTTGGACTGTCTGCTGCAATGTGTTGGCGTCAGCGGCGATGTCTTGTTCTTCGGTTTCCTCATCGCGGCCTTTTGAATGTCCCGACGCCCCCTTCCAAGTCCAGCCCCGCTGCCGCGCCGCCCCCACCCCTCCAGAGGAGAGCGGAGCAGGAAAGAGCCCGTGGCTCCTGCTGCAGGGGCCTTATCTGAACACTGCACACAGTTCGGGGAACACATCCTCTTCCTGGGGCCTCCCATCTGCCAGGAGGAGAGAAAGAACGAAGGGAATGTGGAGGCAGAAGAAGCCAGAGAGTGTCTGAGAACATTCACGGGCCATTTTTGTTGTGTTTACACCCTCATTAGGACGTCCAAGCAGAGTCATGAAACCTGGACTTGCGTTATCTCCGTGTCAGCCTTCCTGCTTGCTTGTTTGTTTGTGTGCGTGTGCACAGCACCGGCGTGGTTTAGCGCAGGCTTCAGAGCGGGGATTCTTCACTGCAAATCATTATGCATTGAGGAGGCCATTAGCAAAATGAAGACGAATGGGAGAGAGAGTTACTGTGATAAAGAGAGCAGTGGAGCTGACTCTCAGGAGGAGAGAGCAGAGGACAGTGAAACAGTAACTAATCCAGAACCAGAGACGCAACAAAATACAGTGACCAGCACGATGACCATGCAGGAGTACTTCGCCCAGCGGATGGCCAAGATCAGGAAGGCTCAGGGAGCACGTGACCCAGCCGTGAGCACCGACACACCGTCTCCATCTGCCTCCACGGAGGACTCCCCGAACACCAGTGATATGGAACAGTCCAAAAAGAAGAAGAAAAAGGACAGAGAGAGTGATAGAAATGGCACAGAGGAAGACGAACTGACCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_00346827_00352024.mRNA True 1137 mRNA 0.51 3 346827 352381

Neighbor

gene id symbol gene type direction distance location
CI01000051_00334616_00337009 SOX7 coding downstream 9630 334053 ~ 337197 (-)
CI01000051_00278614_00302552 NA coding downstream 42454 278192 ~ 304373 (-)
CI01000051_00262483_00263385 BLK coding downstream 83442 262441 ~ 263385 (-)
CI01000051_00224709_00227613 NA coding downstream 119214 224507 ~ 227613 (-)
CI01000051_00131867_00138611 ZNF513 coding downstream 208037 130386 ~ 138790 (-)
CI01000051_00357855_00378052 NA coding upstream 4453 356834 ~ 378052 (-)
CI01000051_00383638_00388102 TDH, TDH.S coding upstream 30941 383322 ~ 388102 (-)
CI01000051_00394082_00407612 MTMR9 coding upstream 40930 392720 ~ 407612 (-)
CI01000051_00478608_00478959 NA coding upstream 125849 475707 ~ 482200 (-)
CI01000051_00505008_00505358 FAM167AB coding upstream 152627 505008 ~ 505468 (-)
G217553 NA non-coding downstream 48559 298050 ~ 298268 (-)
G217417 NA non-coding downstream 128672 216869 ~ 218155 (-)
G217420 NA non-coding downstream 130060 215484 ~ 216767 (-)
G217419 NA non-coding downstream 131703 214080 ~ 215124 (-)
G217424 NA non-coding downstream 132975 213614 ~ 213852 (-)
G217532 NA non-coding upstream 44637 397018 ~ 397424 (-)
G217531 NA non-coding upstream 61465 413846 ~ 414972 (-)
G217573 NA non-coding upstream 75643 428024 ~ 428243 (-)
G217574 NA non-coding upstream 76923 429304 ~ 429545 (-)
CI01000051_00560810_00563417 NA other upstream 209815 560768 ~ 563417 (-)
CI01000051_01785489_01787612 IGFBP1A other upstream 1356917 1784416 ~ 1787760 (-)
G218728 NA other upstream 2174962 2527343 ~ 2546459 (-)
G218861 NA other upstream 2487889 2840270 ~ 2840632 (-)

Expression


Co-expression Network