CI01000051_01644907_01652696 (MCM3L, MCM3)


Basic Information

Item Value
gene id CI01000051_01644907_01652696
gene name MCM3L, MCM3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1644800 ~ 1652719 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_01644907_01652696.mRNA
ATGCTGACACAGGTGTAGCAGAAATGGATACTGGGCTAGAGGACCTTGAGCTGAGAGAGTCACAGAGGGAGTACCTGGACTTTTTGGATGATGATCAAGACCAGGGTATTTATCATGAGAAGGTCAGGAGTATGGTGTCTGAGGGCCAGTGTCGCCTTATTGTTAACATTAATGATCTGCGACGAAAAAGTGAAAAAAGAGCTAAAGAATTACTGAAGAATGCTTTTGCTGAGCTGGTGGCGTTCCAGAAAGCTCTGAAGGACCTCGTGGCTTCAATAGACACCACTTACGCTAAGCAGTTTGAAGAGTTCCACGTTGGTTTTGAGGGCAGCTTTGGGAGCAAACATGTGTCTCCACGTACTCTAAGCGCACGCTTACTGGGAAATCTCGTGTGTGTGGAAGGCATTGTGACCAAGTGTTCCTTGGTCAGGCCCAAGATTATGCGTAGTGTCCACTATTGTCCAGCCACTAAGAAAACCCTGGAACGAAAATACACTGATCTTACTTCATTGGATGCTTTTCCTTCCAGTGCCATCTATCCAACCAAAGATGAAGAAAACAATCCTCTGGAGACGGAGTTTGGGCTGTGCTGCTATAAGGACCACCAGACGCTGACCATTCAGGAGATGCCTGAGAAAGCCCCAGCAGGACAGCTGCCACGATCTGTCGACATCATTGCGAACGATGACCTCGTTGACAGGGTGAAACCAGGTGACCGTGTGCAGATTGTAGGGGTCTACCGTTGCTTGCCTGCGAAACAGGGTGGCTTCACCTCTGGGACCTTCAGAACAATCCTGTTGGCTAACAATGTGAAGCTTATGAGTAAAGAGATTGTGCCGACGTTCTCTGCAGATGATGTTGCCAAGATCAAGAAGTTTTGCAAAGCTCATTCTAAAGATGTGTTTGAGCAGCTGAGCCGTTCTTTGGCTCCCAGTATCCATGGTCATGAGTACATAAAGAAGGCCATTCTGTGTCTGCTGTTGGGAGGCAATGAGACCAACCTGGAGAACGGAACGCGCATCAGAGGAGACATAAATATTCTGCTCATAGGAGATCCTTCAGTAGCGAAGTCTCAGCTGCTGAGGTATGTTTTGTTCACGGCACCGAGGGCAATTCCCACCACTGGACGAGGCTCATCTGGGGTGGGTCTGACAGCAGCGGTCACGACTGATCAAGAGACGGGTGAGCGTCGCTTGGAGGCCGGAGCCATGGTTCTTGCTGACAGAGGTGTGGTGTGCATTGATGAATTTGATAAGATGTCTGACATGGACCGAACAGCTATCCATGAGGTGATGGAGCAGGGTAGGGTCACCATTTCCAAAGCTGGGATTCAGGCGAGGCTTAATGCTCGCTGCAGTGTGTTAGCTGCTGCTAACCCGGTGTATGGAAGGTATGACCAGTATAAGACCCCAATGGAGAACATCGGGCTCCAGGATTCCTTGCTTTCCCGATTTGATCTGCTCTTCATTGTTCTGGATCAGATGGATCCGGATAGCGATCGGGAGATCTCGGAGCATGTGCTGCGGATGCATCGTTACAGAGCGCCGGGAGAGCCGGAGGGAGCAGCAATGCCGCTGGGAAGTACAGTAGACGTATTCGCCACAGACGACCCAAACATCACAGAAGCAGCTGAGCAGGAGCTACAGATCTATGAGAAAAAAGACACTGTCCTGCATGGCCACAGGAAGAAAAAGGAGAAGGTTGTTACCATGGAGTTCATCAGGAAGTACATCCATGTTGCTAAGCTGGTAAAGCCGGTCCTGACGCAGGAGGCATCGGACTACATAGCAGAGGAGTATTCCAGACTCCGGAGCCATGACCAAGTCAACAGTGACTCCGCCAGGACGATGCCTGTGACCGCTCGAGCTCTGGAAACCATGATTCGATTGTCTACAGCTCACGCCAAGGCCCGCATGAGTAAAACCATCGATCTGGGAGATGCAGAAGCTGCACTTGAACTCATGCAGTTTGCTTATTTCAAAAAGATTCTGGAGAAGGATAAGAAGAGGAAGGTACCCGAGGACTCCGAGATGGACGTCTCTCAGAGCCAAGAGACAGAGAGTCAAAGGAGCCTGAGGAAGCGTTCTCGCATCTCTAAAGATGATGATGTGGAAATGACCCAAGAAGGAGAAGACTCTGACCCTTATGATTTCACAGAGGAGGAAAACAGTAGGGTTAATATTTTGAATGTTTTCAGTGATAAGTTTGAAACTGATCCAAATGTGGTGATGTTGTTAATGATGACAGCTCAGTCGAGTCAGAAGAGCAGGCCGGTGTCTCAGAGGAGCAGTCAGAGGAAGAAGGCTGACATCAGTCAGGACAGATTGAAAGTCTTCAAGGCGGCTCTACTGAAAGCCTTCAAGGTGACCCGGTCTCAGTCTGTGGCAGTGCCTGATCTTCTGACTCACATTAACAAAGGCCAGGACGAGGAGTTTGACCAGACCGAGATTAACCTTCTGCTGGAGCGCATGCAGGATGACAACCAGGTCATGCTCTCAGAGAACGTGGTGTTTCTCATCTAAAGGATTGCCAATGGACAGCTGCAGCTTTTGTGAATTCAGAAATGTAGATAACATTGAAAGTATTTATATGCCAGCTCTGTTACAGACTGTAGCAAATTACTAATAAA

Function

symbol description
mcm3 Enables chromatin binding activity. Acts upstream of or within retina development in camera-type eye. Predicted to be located in chromosome. Predicted to be part of MCM complex. Predicted to be active in nucleus. Is expressed in several structures, including alar plate midbrain region; blood; immature eye; nervous system; and pectoral fin musculature. Orthologous to human MCM3 (minichromosome maintenance complex component 3).
mcm3l Predicted to enable single-stranded DNA binding activity. Predicted to contribute to single-stranded DNA helicase activity. Predicted to be involved in DNA-dependent DNA replication and double-strand break repair via break-induced replication. Predicted to act upstream of or within DNA duplex unwinding and DNA replication initiation. Predicted to be located in chromosome. Predicted to be part of MCM complex. Predicted to be active in nucleus. Orthologous to human MCM3 (minichromosome maintenance complex component 3).

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K02541 MCM3; DNA replication licensing factor MCM3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_01644907_01652696.mRNA True 2629 mRNA 0.49 17 1644800 1652719

Neighbor

gene id symbol gene type direction distance location
CI01000051_01560871_01627451 TRAPPC8 coding downstream 17135 1560828 ~ 1627665 (-)
CI01000051_01528013_01535266 OPN7A coding downstream 109534 1527909 ~ 1535266 (-)
CI01000051_01511542_01512516 NA coding downstream 132246 1511143 ~ 1512554 (-)
CI01000051_01468663_01486168 B4GALT5, B4GALT6 coding downstream 157628 1468419 ~ 1487172 (-)
CI01000051_01371462_01386606 NA coding downstream 258194 1371462 ~ 1386606 (-)
CI01000051_01716468_01720230 NA coding upstream 63740 1716459 ~ 1720908 (-)
CI01000051_01785489_01787612 IGFBP1A coding upstream 131763 1784416 ~ 1787760 (-)
CI01000051_01789888_01790134 NA coding upstream 137042 1789761 ~ 1790134 (-)
CI01000051_01809480_01841801 ADCY1A coding upstream 156761 1809480 ~ 1841801 (-)
CI01000051_01852579_01861297 NA coding upstream 199705 1852424 ~ 1861883 (-)
G218558 NA non-coding downstream 98934 1545630 ~ 1545866 (-)
G218532 NA non-coding downstream 153921 1490663 ~ 1490879 (-)
G218521 NA non-coding downstream 201742 1439176 ~ 1443058 (-)
G218497 NA non-coding downstream 256287 1388257 ~ 1388513 (-)
G217813 NA non-coding downstream 466529 1178026 ~ 1178271 (-)
G218568 NA non-coding upstream 12985 1665704 ~ 1665926 (-)
G218569 NA non-coding upstream 13768 1666487 ~ 1666830 (-)
G218571 NA non-coding upstream 16548 1669267 ~ 1669721 (-)
G218572 NA non-coding upstream 17012 1669731 ~ 1669947 (-)
G218573 NA non-coding upstream 21732 1674451 ~ 1674681 (-)
CI01000051_00560810_00563417 NA other downstream 1077645 560768 ~ 563417 (-)
CI01000051_00394082_00407612 MTMR9 other downstream 1239005 392720 ~ 407612 (-)
CI01000051_00278614_00302552 NA other downstream 1362171 278192 ~ 304373 (-)
CI01000051_00224709_00227613 NA other downstream 1401774 224507 ~ 227613 (-)
G218728 NA other upstream 874624 2527343 ~ 2546459 (-)
G218861 NA other upstream 1187551 2840270 ~ 2840632 (-)
CI01000051_02955633_02960400 SCRN2 other upstream 1306869 2955380 ~ 2961148 (-)
G220041 NA other upstream 2503011 4155730 ~ 4158103 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017895 mcm3l coding NC_007131.7 CM002904.2 6516523 ~ 6532462 (-)