CI01000051_01716468_01720230


Basic Information

Item Value
gene id CI01000051_01716468_01720230
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1716459 ~ 1720908 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_01716468_01720230.mRNA
ACATCTGAACAAGTGAGACACTATCTTTATATCCGACCAAGTCTGAATAAGCAAACCATTATACTACCCTCTCTCTCTCTCTCACCAGAGAATATAGTGAGCTCATGCCACCTGCAGTCTACCACATTATGCTGAATCAATGTCTTTGAAATGGTCAAAGTTGTAATAATAAAGCTTTTCTTGTCCTACGAGAGCTACCTGACAGAAGTGTCCTGAGGAATTAATTTTCAACCTAATTTCAACCAGTTTATGTGAGTCGTAGCATAGGCCTACCTGTAAAAATGGTTAGTCGTTAGCATTCCCATTCATTTCAATGGCAGTTGCTCGGCTGGTCCTGGAAATACACAATCTGGATGCTGCCATCTTTGCTTCATGAGGATTTTTTGAGCCCATCACCTCGTTTCTAAATGTCACGTGACTGGTCATGCTATATAAGAACTTCCTTCAGCAGACAAGACAACACAAGTCGTAGGTTTCCAAGATGGCAGCGGTGTGAATGATCACGTTTTATACGCGTCTAAGTAGTTTGAGGAGTTTGAAGCTAACAAACAGAAATTTGAGTATGTAGTTACAATTTTGAAAATGTATGCTTTTTCGATATTTTTCTGGCAATACTTGCACCTTCTGCCGTGATATAAAGGGCAAAAAAAGGAAAAATCAGCAGAAAGCTTCGATGAAATGCAACGGTACTCACGTAGATGGAATCTCAAGCTACAGGGGGTCCTAGAGTGCGATGGAGAAGATGCGAGAAGCGTGACAATCGACATCCTAAGAAAGATGGTCCCTAGTATCCAGAACAAGTTGGATGATGTAGTTGATGTTGTACACCGCCTGGGGCAAAGGAGATCCGACGGAGCACCTTGTAACATCATCGTGCGTTTTACCATGCGAACCTACAGAGACATGGTATGGCGTGCTGCGAATGACTCTCGCTATCTAAAAGAAAACAAGCTTCGGATCAAGGAGGCGCTGATCAAACAAGATGTTGAGGCTAGAGCCAAATTATGGCCGTTGGTTAAGAAGGCTCGTGAGGAGGGGAAGAAGGCCTTCAACTTTGCTTTGATCAGACTCTGTTTATGGCAGTGCGAGAGTGAGCCAAAGAAGTGTGGCGCCCCCTACTGGATGTACTGGTGTCCTGTGATGCAACAGTACTGCATGGATTTCAAAGACGTCCTGGGAAAATTATCCTCAGAGCTGTCATCAGGAACGTTGTCCCGGGACTTGTCCATTAAGGTCCACCTATAAATGTATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_01716468_01720230.mRNA True 1254 mRNA 0.44 2 1716459 1720908

Neighbor

gene id symbol gene type direction distance location
CI01000051_01644907_01652696 MCM3L, MCM3 coding downstream 63740 1644800 ~ 1652719 (-)
CI01000051_01560871_01627451 TRAPPC8 coding downstream 88794 1560828 ~ 1627665 (-)
CI01000051_01528013_01535266 OPN7A coding downstream 181193 1527909 ~ 1535266 (-)
CI01000051_01511542_01512516 NA coding downstream 203905 1511143 ~ 1512554 (-)
CI01000051_01468663_01486168 B4GALT5, B4GALT6 coding downstream 229287 1468419 ~ 1487172 (-)
CI01000051_01785489_01787612 IGFBP1A coding upstream 63574 1784416 ~ 1787760 (-)
CI01000051_01789888_01790134 NA coding upstream 68853 1789761 ~ 1790134 (-)
CI01000051_01809480_01841801 ADCY1A coding upstream 88572 1809480 ~ 1841801 (-)
CI01000051_01852579_01861297 NA coding upstream 131516 1852424 ~ 1861883 (-)
CI01000051_01894807_01902190 SIRT5 coding upstream 173411 1894319 ~ 1902190 (-)
G218578 NA non-coding downstream 25165 1691054 ~ 1691294 (-)
G218454 NA non-coding downstream 27248 1688421 ~ 1689211 (-)
G218576 NA non-coding downstream 32196 1683940 ~ 1684263 (-)
G218464 NA non-coding downstream 33191 1682910 ~ 1683268 (-)
G218575 NA non-coding downstream 37163 1678981 ~ 1679296 (-)
G218613 NA non-coding upstream 67418 1788326 ~ 1788896 (-)
G218617 NA non-coding upstream 75604 1796512 ~ 1796923 (-)
G218621 NA non-coding upstream 79969 1800877 ~ 1801108 (-)
G218629 NA non-coding upstream 143209 1864117 ~ 1864351 (-)
CI01000051_00560810_00563417 NA other downstream 1149304 560768 ~ 563417 (-)
CI01000051_00394082_00407612 MTMR9 other downstream 1310664 392720 ~ 407612 (-)
CI01000051_00278614_00302552 NA other downstream 1433830 278192 ~ 304373 (-)
CI01000051_00224709_00227613 NA other downstream 1473433 224507 ~ 227613 (-)
G218728 NA other upstream 806435 2527343 ~ 2546459 (-)
G218861 NA other upstream 1119362 2840270 ~ 2840632 (-)
CI01000051_02955633_02960400 SCRN2 other upstream 1238680 2955380 ~ 2961148 (-)
G220041 NA other upstream 2434822 4155730 ~ 4158103 (-)
G221575 NA other upstream 3793044 5513952 ~ 5518824 (-)

Expression


Co-expression Network