CI01000051_01852579_01861297


Basic Information

Item Value
gene id CI01000051_01852579_01861297
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1852424 ~ 1861883 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_01852579_01861297.mRNA
TGGGTTATTTCTGTTTTGGTGAGTCGAAAGGAAAACATCATTCGCTCGTTTCATATACACCACCGAGCGTCATACATGAAGCCTGCCCTACTGCTCGCCGTTTTTCCATTTAAGACGAGCCCTGTCAGAGCTGCGCTGCTGTCTTGTCTTATCTTTTTTGAGGACTGGGAGACGTGCTTGGTTTCTCAATCTCGGGCTGACATTGCGCATGCGTGATCCGGCCGCGGCGCTGAGATGCAGTTGTGGGATGCGGAGAGGGGAGTCCCGGCTCTGCGTGGTCGATGTTAACCTCTTTCTGGGGCCGAACAAACGCTACGGGTGGTCTGTTCCCTGGAGACCGCCTTGAGGAGGGAGGAGAGAGAGCGAGGGAGAGAAAAGAGGAGGCGGGTGCTGTCTGCGCTCGTTACAACAGTCACCAACCTGTGGATGGTGGCGGCGCGTGCTGCGGATTAGATACAGTCTCGCGCTGGGGTCAGTGTGCGCGAGCCCGTCTCGAGGCGCGACAGTTGCCGCCAGGACCGCGACAACAAGTGCTGGACATGCGGTGCTTGTGAAGAAGAGCTCTGGCTGTATGAATGGCCCCGCTATGGACGAAGTTCCGTTTCCCAGAGTCCGCACGCGGCGGAGGAAAAGTCGCTGCTTGGCCGGTGCGTGCGAGCACGAGTTTGACTGCAAGGAGCTCGAGACTCTCTTCCAGAAGTACAACCTGAAGCTCGAGCAGAACGCCACGCTCAAAGCGCTGGCCATCCTCATCCTCGCCGCGTCCGCGTTGGCGCTCGTGGAGCTGCTGTCCGCCGGCTCGCGCTTCACCGTGTCCAAGGGCTCGCACCCGGTCCACTGCGTCATCTTCACCTCACTCTTCATCGTCACCAACGTCAAATATCTGCAGGTCACGCAGCTGCAGCAGATCGCGCGACTCGCGCTGCTCTTCAGCTTCACATTCGCGCTGCTCTGTTGCCCGTTTCCTCTCGCGCTGGGTCACGGGACGCAGGGCGCGCAGGGGCCTGACGCACCGAGCACAACACCTGAGCAAGGTGTCTGGCAGCTGATGCTCGTTACTTTCGTTGCCTACTCTCTGCTACCGGTCAGGACGCTCTTGGCGGTGTTGTTTGGCATCCTGGTGGCTGCGTCGCATTTCATCGTGACGGCGACATCGTTAACGGCACGTAGACCTCGCGTGTGGACACCGCTGGTAGTGAACGCAGTGTTGCTGGTCGGCGTGAATCTGTCGGGTGTGTTTGTGCGAATCCTTACTGAGCGCGCCCAGAGGAAGGCCTTCCTACAGGCCAGAAACTGCATCCAACAGCGCCTGCAACTAGAGGATGAGAACGAGAAACAGTGCACGATCATGAGGAACAGAACAAAAACAGTCTTTAATCTTAATCCAAAAATGGAACATGCAGCAGGCGATAACCAGGGTATAACTCACAACAAAACGTTAATGACGCGGAACACAGAAATTAGTAAACTAAGGACCTAAATAGAGCTAATTGACAACCAAGGAGATTAACTAAGAACACAGATGGGCAGTCACAGAGAAAAATACAAAACTCAATGACAGTAAAACAGAACATACACGTCGCAGTATCATGTTCCATGATTTTTTTTTTAACAGTAAAATGGGTTGCAAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_01852579_01861297.mRNA True 1635 mRNA 0.55 3 1852424 1861883

Neighbor

gene id symbol gene type direction distance location
CI01000051_01809480_01841801 ADCY1A coding downstream 10623 1809480 ~ 1841801 (-)
CI01000051_01789888_01790134 NA coding downstream 62290 1789761 ~ 1790134 (-)
CI01000051_01785489_01787612 IGFBP1A coding downstream 64720 1784416 ~ 1787760 (-)
CI01000051_01716468_01720230 NA coding downstream 131516 1716459 ~ 1720908 (-)
CI01000051_01644907_01652696 MCM3L, MCM3 coding downstream 199705 1644800 ~ 1652719 (-)
CI01000051_01894807_01902190 SIRT5 coding upstream 32436 1894319 ~ 1902190 (-)
CI01000051_01915943_01920786 NA coding upstream 53491 1915374 ~ 1920786 (-)
CI01000051_01926867_01942055 DHCR24 coding upstream 64803 1926686 ~ 1942055 (-)
CI01000051_01989511_02060303 USP24 coding upstream 127588 1989471 ~ 2060303 (-)
CI01000051_02148607_02152701 NA coding upstream 286586 2148469 ~ 2153425 (-)
G218621 NA non-coding downstream 51316 1800877 ~ 1801108 (-)
G218617 NA non-coding downstream 55501 1796512 ~ 1796923 (-)
G218613 NA non-coding downstream 63528 1788326 ~ 1788896 (-)
G218471 NA non-coding downstream 89513 1707837 ~ 1762911 (-)
G218629 NA non-coding upstream 2234 1864117 ~ 1864351 (-)
G218630 NA non-coding upstream 4556 1866439 ~ 1866639 (-)
G218468 NA non-coding upstream 30962 1892845 ~ 1893626 (-)
G218641 NA non-coding upstream 85726 1947609 ~ 1947949 (-)
G218450 NA non-coding upstream 90923 1952806 ~ 1954033 (-)
CI01000051_00560810_00563417 NA other downstream 1285269 560768 ~ 563417 (-)
CI01000051_00394082_00407612 MTMR9 other downstream 1446629 392720 ~ 407612 (-)
CI01000051_00278614_00302552 NA other downstream 1569795 278192 ~ 304373 (-)
CI01000051_00224709_00227613 NA other downstream 1609398 224507 ~ 227613 (-)
G218728 NA other upstream 665460 2527343 ~ 2546459 (-)
G218861 NA other upstream 978387 2840270 ~ 2840632 (-)
CI01000051_02955633_02960400 SCRN2 other upstream 1097705 2955380 ~ 2961148 (-)
G220041 NA other upstream 2293847 4155730 ~ 4158103 (-)
G221575 NA other upstream 3652069 5513952 ~ 5518824 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017898 adcy1a coding NC_007131.7 CM002904.2 6894886 ~ 7000225 (-)