CI01000051_01894807_01902190 (SIRT5)


Basic Information

Item Value
gene id CI01000051_01894807_01902190
gene name SIRT5
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1894319 ~ 1902190 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_01894807_01902190.mRNA
ATTTAACAAAATTTCGTGAGGAGTTTGCTAAAGCGAAGCACATTGCTATCATTACGGGGGCTGGAGTGAGTGCAGAGAGTGGTGTACCAACCTTTAGAGGACAGGGGGGCTACTGGAGGAAATGGCAGGCGCAGGATTTGGCAACCCCTGAAGCTTTCTCTCGAGATCCTTCATTAGTATGGGAATTTTACCATTACAGGCGTGAGGTAATGCGCAGTAAGATGCCGAACCCAGCACATCTGGCGATAGCGGAGTGTGAGTCCCGTCTCAGCCAGCAGGGGCGCTCTGTTGTGATCATCACTCAGAACATCGATGAACTGCACCATCGTGCTGGCTCCAAACATGTCTATGAGATCCATGGTAGTCTATTTAAAACTCGCTGCATGAGCTGTGGAGAAGTCAAAGCCAACCACAAGAGTCCAATCTGCCCTGCTCTGGAGGGGAAAGGGTGTGAAAGGAGGGGCTGTAACGGCTTGCTGAGGCCTCATGTGGTTTGGTTCGGAGAGACTTTAGATTCAGATATTCTCACTGCTGTGGAGCAGGAGCTGGAAAAGTGTGATCTCTGCTTAGTGGTGGGGACCTCCTCCATAGTTTACCCAGCGGCCATGTTTGCTCCTCAGGTGGCGGATATCACTTTGAGGGTCCTTGTTGCACCACACTGCCTCCCGCCCTGGAACAGCACAAGAGCGAGGCCATATAAGGAGAAAGAAGGCATGACCCATCCGTTCATGCCCACTGCATTTAGCACTTTAACTGAGAGCACATGAACACGCGCTGGGATTGGTTCATGCCTTCATGTGATTGGTTTTCCTATGTGTGCTGTGCTCATCTATGAAGATTTACAGCAAAATTTGGCTGAAATTAAATTTTAAATAATGTCTTTGCTTGGCCTATGTGGCAGCAGTTTTGTGAAAGTTGTGTTTTTTAGGTTCTTAGTAAATTTGTTCCAGTTGAGTAACTTCTGGGTAGATCGTTTACGGTCTTCCCACAGTCTTGGACAACCTGGAAAAAAATTAATTTTATAATTGTAATTTACAGGAAAAGTCATGGAAATTGATAGTCTTGAAAACTTATGGAAAGTTCTGTCATGAGTAAATCCGCTGTATCATGATCCACTGTAAAATATTTAATCATCTAGAAATAACTGGTTAGAAAAATCATGGAAATTCGTTGGTCAAATGTTGTGGGAACCCTGAAAGTAGGACTAGAGACCAGTGAAATGCATTTATTTTGATTTAAATGACCATAAAATAAA

Function

symbol description
sirt5 Enables acyl binding activity and heterocyclic compound binding activity. Predicted to be involved in protein deacylation and regulation of ketone biosynthetic process. Predicted to be located in cytoplasm and nucleus. Predicted to be active in cytosol and mitochondrion. Is expressed in liver and retina. Orthologous to human SIRT5 (sirtuin 5).

GO:

id name namespace
GO:0052790 chitooligosaccharide deacetylase activity molecular_function

KEGG:

id description
K11415 SIRT5, SIR2L5; NAD+-dependent protein deacetylase sirtuin 5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_01894807_01902190.mRNA True 1255 mRNA 0.45 7 1894319 1902190

Neighbor

gene id symbol gene type direction distance location
CI01000051_01852579_01861297 NA coding downstream 32436 1852424 ~ 1861883 (-)
CI01000051_01809480_01841801 ADCY1A coding downstream 52518 1809480 ~ 1841801 (-)
CI01000051_01789888_01790134 NA coding downstream 104185 1789761 ~ 1790134 (-)
CI01000051_01785489_01787612 IGFBP1A coding downstream 106615 1784416 ~ 1787760 (-)
CI01000051_01716468_01720230 NA coding downstream 173411 1716459 ~ 1720908 (-)
CI01000051_01915943_01920786 NA coding upstream 13184 1915374 ~ 1920786 (-)
CI01000051_01926867_01942055 DHCR24 coding upstream 24496 1926686 ~ 1942055 (-)
CI01000051_01989511_02060303 USP24 coding upstream 87281 1989471 ~ 2060303 (-)
CI01000051_02148607_02152701 NA coding upstream 246279 2148469 ~ 2153425 (-)
CI01000051_02297468_02301682 PLPP3 coding upstream 394711 2296901 ~ 2311967 (-)
G218468 NA non-coding downstream 693 1892845 ~ 1893626 (-)
G218630 NA non-coding downstream 27680 1866439 ~ 1866639 (-)
G218629 NA non-coding downstream 29968 1864117 ~ 1864351 (-)
G218621 NA non-coding downstream 93211 1800877 ~ 1801108 (-)
G218617 NA non-coding downstream 97396 1796512 ~ 1796923 (-)
G218641 NA non-coding upstream 45419 1947609 ~ 1947949 (-)
G218450 NA non-coding upstream 50616 1952806 ~ 1954033 (-)
G218475 NA non-coding upstream 58414 1960604 ~ 1960879 (-)
G218460 NA non-coding upstream 58867 1961057 ~ 1964366 (-)
G218461 NA non-coding upstream 62646 1964836 ~ 1968831 (-)
CI01000051_00560810_00563417 NA other downstream 1327164 560768 ~ 563417 (-)
CI01000051_00394082_00407612 MTMR9 other downstream 1488524 392720 ~ 407612 (-)
CI01000051_00278614_00302552 NA other downstream 1611690 278192 ~ 304373 (-)
CI01000051_00224709_00227613 NA other downstream 1651293 224507 ~ 227613 (-)
G218728 NA other upstream 625153 2527343 ~ 2546459 (-)
G218861 NA other upstream 938080 2840270 ~ 2840632 (-)
CI01000051_02955633_02960400 SCRN2 other upstream 1057398 2955380 ~ 2961148 (-)
G220041 NA other upstream 2253540 4155730 ~ 4158103 (-)
G221575 NA other upstream 3611762 5513952 ~ 5518824 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017899 sirt5 coding NC_007131.7 CM002904.2 7052870 ~ 7069612 (-)