CI01000051_01915943_01920786


Basic Information

Item Value
gene id CI01000051_01915943_01920786
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1915374 ~ 1920786 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_01915943_01920786.mRNA
TCCGAGAGTTACTACAGCTGCAGACCGGTTCCTCCTTCATCGTATATTTATGGTGTTCTGGCCAACGTGACGCGCAACCGGCCACCAACGATTTACATAGTCACGGCTGATCGTCCTGACAGAGAGCCTCCCGTCACTGCTAAACTCCTTCACCTCATGTTTCTCTCCACCTTCTGGGGAATGCAGATATGGGTCACCTTCATATCAGGCTTTGTGATGGACAACCATCTAAACCGACACACGTTTGGCTTCATCCAGAGCCGGCTCTTCCCGTTTTACCTGCATATCGGCTCAGCCTGCGCTTTCTTCAACCTCACCATCTTCGCCATGTACCATCCCAGCAACATGCTGGATGACAGAGAGGCCTTCCAGATCTTCATTTATTTTGTTTGTGTGACTGTGGCGGCAGTAAATGCCCAGTGGTTTGGTCAGATGACCTCCGAAATCATGGCGGACATGCACCTGATTGAGCAGGCCTGTGGATTGGGTCAGGACATCGGACTTTCATCCAATCGGGAAGCTTACGCCAAGCTCTGTGAGACGGACCACAAGTACAAAAAGCTGAGTGGTCGGCTGTGGCTGTATCACCTGCTGTCCTCCCTCTGTAACCTCTGCTGTATCATATGTAACGGATACAGTCTGTATTACCTGGCAGAAAACCTCACCACACTCTGATGACCTTCCTATAATATAGTGGAGTTCTACGCCCATAATGCAATTCAAAACCTTCGGTTAGTGTCTGTGTGACTCCGGCAGCGACGACCTGCTCTCAGGTACTGGATTACTTCCTGACAAATCTGGTCATTCTTGTAATGGATTGTCTTTTTTAATCTTTGTTGTGCTAATTTTAGCATAGATATATGGTGTATAGAGAATATTTTTTGTAAATGTTATAGATAATGACTGTGCATATTTAAATTTAAAAGATGTTACTCTGCATGCTTGAGGAATGGGGAAAAAAATGACATGCGAGTTGAAATGAACAAAAATGGGAAGTGGAATTATATTTTCAAAACTTTTTTTTTTCATTCTAGAAGTCGTTATGGCACACATTTTCTGTTTTCTAAACAAAAGCAACCTCACTCTATCACAAAACAAATTAATTTATCAAATTATTTGATTTCTCTGTTTCAACAGCCTTTCCTCCTGGACTGATCACGCACAATCTTTCACTGCACTTCTGCATTTTAACACAATATGCTAGTTATGCTCTCACCTGAATGTTGAAATAGAGCTTAAATAAA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_01915943_01920786.mRNA True 1244 mRNA 0.43 4 1915374 1920786

Neighbor

gene id symbol gene type direction distance location
CI01000051_01894807_01902190 SIRT5 coding downstream 13184 1894319 ~ 1902190 (-)
CI01000051_01852579_01861297 NA coding downstream 53491 1852424 ~ 1861883 (-)
CI01000051_01809480_01841801 ADCY1A coding downstream 73573 1809480 ~ 1841801 (-)
CI01000051_01789888_01790134 NA coding downstream 125240 1789761 ~ 1790134 (-)
CI01000051_01785489_01787612 IGFBP1A coding downstream 127670 1784416 ~ 1787760 (-)
CI01000051_01926867_01942055 DHCR24 coding upstream 5900 1926686 ~ 1942055 (-)
CI01000051_01989511_02060303 USP24 coding upstream 68685 1989471 ~ 2060303 (-)
CI01000051_02148607_02152701 NA coding upstream 227683 2148469 ~ 2153425 (-)
CI01000051_02297468_02301682 PLPP3 coding upstream 376115 2296901 ~ 2311967 (-)
CI01000051_02359343_02360115 NA coding upstream 438305 2359091 ~ 2360115 (-)
G218468 NA non-coding downstream 21748 1892845 ~ 1893626 (-)
G218630 NA non-coding downstream 48735 1866439 ~ 1866639 (-)
G218629 NA non-coding downstream 51023 1864117 ~ 1864351 (-)
G218621 NA non-coding downstream 114266 1800877 ~ 1801108 (-)
G218617 NA non-coding downstream 118451 1796512 ~ 1796923 (-)
G218641 NA non-coding upstream 26823 1947609 ~ 1947949 (-)
G218450 NA non-coding upstream 32020 1952806 ~ 1954033 (-)
G218475 NA non-coding upstream 39818 1960604 ~ 1960879 (-)
G218460 NA non-coding upstream 40271 1961057 ~ 1964366 (-)
G218461 NA non-coding upstream 44050 1964836 ~ 1968831 (-)
CI01000051_00560810_00563417 NA other downstream 1348219 560768 ~ 563417 (-)
CI01000051_00394082_00407612 MTMR9 other downstream 1509579 392720 ~ 407612 (-)
CI01000051_00278614_00302552 NA other downstream 1632745 278192 ~ 304373 (-)
CI01000051_00224709_00227613 NA other downstream 1672348 224507 ~ 227613 (-)
G218728 NA other upstream 606557 2527343 ~ 2546459 (-)
G218861 NA other upstream 919484 2840270 ~ 2840632 (-)
CI01000051_02955633_02960400 SCRN2 other upstream 1038802 2955380 ~ 2961148 (-)
G220041 NA other upstream 2234944 4155730 ~ 4158103 (-)
G221575 NA other upstream 3593166 5513952 ~ 5518824 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location