CI01000051_03679568_03682342


Basic Information

Item Value
gene id CI01000051_03679568_03682342
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 3679437 ~ 3682528 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_03679568_03682342.mRNA
CTATAAATTTATAGAAGAAAACAAGGGAAGGACATTGTGGTGTCACTGGGCAGATTGTTCAAACACATGCTCCAAACTGTCCAAATGATCCTCAGTTTCCTCCTCCCATTTTTAACAAACATCTGAGAGACATGCGTGGGAAGATCATTATCTATTCAACTTGTGCCATCCTCTCAGGACTTCTGAAAGCATACCGCAAGCCTATTCTCCCTGAGTTCAGAGAGATCCCTGTCCACCGCTCGCTGTCCCCTCCTCCTCCTTTCCTGAAGAATGAGAGATTTGATGGGAGAAAAAGAGATGGGTTTGACTCTGGGTGTTTTCTGGTCCACTTCGAGGTCATGCAGAAGGGGGCAAATGCATCTGGATGGGTGTGTTTGTTTGCTTGGTTAAGAGCTGCTCTCTCAGCACGTTCCGAGACTGATACTCTCATGGAGATTTCAACAGTGCTATCTAAAACAGTGCCGGCTTCTCTGAGGCTTGTGTCTTGTGGCTTTTCTTGTACTGCGAAGGCTGTATTTTGTGGATTGTGTCTTATTTTGAGGACTGTGAGAGTCATAAAGCTAACTAAAATCCGCACACAGAAAAAGAAGCCGCTCTTGGACGAAGTTCCATGTCATTACTCTTCAGAGAACATTCCGTGCTGAAGTGCTGGCACATGGCTCACCTGTAGCACATGTGAAACGTCTTAAAATTTTCACACTCAAATTCTTTCACACTCAAATGGCATTATTACCTACCATTTAGTAAAACTGTAGAGAGACACTGAAATGTTAAGAAACTTATGTAATATTCTAATTGAAGGGGTGACAGTAGAATGTGATGCTGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_03679568_03682342.mRNA True 830 mRNA 0.43 4 3679437 3682528

Neighbor

gene id symbol gene type direction distance location
CI01000051_03457204_03459579 NA coding upstream 219513 3456959 ~ 3459924 (+)
CI01000051_03443548_03451188 NA coding upstream 227623 3443548 ~ 3451814 (+)
CI01000051_03435613_03439371 NA coding upstream 239586 3435613 ~ 3439851 (+)
CI01000051_03431193_03432454 JUN coding upstream 246649 3430291 ~ 3432788 (+)
CI01000051_03147600_03152676 MYOC coding upstream 526343 3147234 ~ 3153094 (+)
CI01000051_03687377_03698806 ANGPTL1A, ANGPTL1 coding downstream 4796 3687324 ~ 3698963 (+)
CI01000051_03800655_03819155 ZYG11B, ZYG11 coding downstream 118127 3800655 ~ 3819197 (+)
CI01000051_04038453_04045552 TMEM30A, TMEM30AA, TMEM30AB coding downstream 355879 4038407 ~ 4046528 (+)
CI01000051_04071144_04075444 KCNK13B coding downstream 388616 4070951 ~ 4077125 (+)
CI01000051_04081532_04085798 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding downstream 399004 4081532 ~ 4085922 (+)
G219176 NA non-coding upstream 26842 3649759 ~ 3652595 (+)
G219237 NA non-coding upstream 31674 3647487 ~ 3647763 (+)
G219210 NA non-coding upstream 77523 3601657 ~ 3601914 (+)
G219195 NA non-coding upstream 83164 3595399 ~ 3596273 (+)
G219203 NA non-coding upstream 86107 3593100 ~ 3593330 (+)
G219249 NA non-coding downstream 26102 3708630 ~ 3709760 (+)
G219303 NA non-coding downstream 96104 3778632 ~ 3782075 (+)
G219253 NA non-coding downstream 128217 3810745 ~ 3825351 (+)
G219314 NA non-coding downstream 149881 3832409 ~ 3832658 (+)
G219316 NA non-coding downstream 152760 3835288 ~ 3835504 (+)
G218981 NA other upstream 432564 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 1613354 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 2954733 637590 ~ 720669 (+)
G217075 NA other upstream 3295309 324465 ~ 384128 (+)
CI01000051_04374052_04393328 NA other downstream 691882 4372658 ~ 4393677 (+)
G219803 NA other downstream 1232446 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 3143271 6825895 ~ 6830637 (+)
G221319 NA other downstream 3659513 7342041 ~ 7342546 (+)
G221386 NA other downstream 3726995 7401175 ~ 7413007 (+)

Expression


Co-expression Network