CI01000051_03687377_03698806 (ANGPTL1A, ANGPTL1)


Basic Information

Item Value
gene id CI01000051_03687377_03698806
gene name ANGPTL1A, ANGPTL1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 3687324 ~ 3698963 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_03687377_03698806.mRNA
CCATAAAAACAAGAGCTCAAACTCTTTTACTCACTTCAGAGGAAGTCACAATAATGTCATGCCAGACACCACAGGCTGAAACGAGGAGCTGGGCGCTAAGTGTAGAGAGAGGCAATGAGCTAATGACTGGAGCTCAGATCCAACTCCAGCACAGCCAAGGAAAAACAGCTCCTGGTGGCCCACCAAAGCACACCGCACACGAGCAGGCCAGCCAGAAAGCAGCAAGTAATCCACAAGTGAAGAATTGGATTTACCACTGTCTGGAGGTTGAGGAAGAGAAGAGCAAAAAGCTACCAAAAAGTAGCAAGTGCCACTCAGGAAATGAACTCATGCAATCTCGAAAACGGCGAGCACCTGCCGATGACTCCAAGAAATGCTCCTACACTTTCCTGGTGCCCCAGCAGAAAATCACAGGCCCGATCTGTGCCTCTGCCACCGGACCTGAGCCAGACAAAGACCGGGTGACACGTATGGACATTGCTGATGTGCGGGAGGTCCTTTCCAAGCAGCGACGAGAGATTGAAATGCTGCAACTAGTGGCTGATGTGGATGGGAACTTGGTAAATGAGATGAAGCTTCTACGCAAAGAGTCTCGTAACATGAATTCCAGAGTGACGCAGCTTTACATGCAGCTGCTTCATGAAATCATCCGCAAGAGGGACAACTCCCTGGAACTGGCGCAGCTGGAGAACCGCATATTGAACGTCACCACGGAGATGCTCCGACTGGCCTCCCGTTACAAAGAGCTGGAGCTGCGTTTCGCAGGCCTTGCTGCCACAGTCAACAACCAATCTGTGCTCATCGCCGCCCTAGAGGACCGCTGTCTCCGTGGATATGGACGTCAAGATCTGCCAGCAGTGCCGCCGCTGGTGCAGGTGGTACCGGAGAGCATTCCGGCCAACAACAACCGCTTCACCAATGAGATTCAGAGAGACAACAACAATCGAGCATATCCTAGAGGATCACGAATGGACGCCCCAACACCCGACCCACTGGGAATCCCACCACCCCCACAGGGCACCCTCACCTCAGATGGAAAACTCTTCTTATACAACACACCAACCATATCGCCCAAAAGGGCCTTTGGCAAAGGGAATCTCTCTTTCTTCCTCTCTCGCTCTACATCTCTGGCTCACCCCTATATGACTGATAATGATTTTAGCTTAAGCTCAAGCCCGTTCAGAGACTGTTTCCAGGTGCGGCAGGCGGGGCACAGCACCAGTGGGATGTATCTGTTGAAGGCAGAGGGTAGTGATAGACTGATTCAGGCCTGGTGTGAACATAAATTAGACAATGGAGGCTGGACCGTTTTTCAGCGAAGGAAAGATGGCTCAGTCAACTTCTTCAGAAACTGGGAGAACTACAAGAAAGGCTTTGGGAACATAGATGGAGAACACTGGCTGGGCTTGGAGAACATCTATAACCTAGCCAAGCAGGGGGACTACAAATTGCTGGTGGAGCTGGAGGACTGGGTTGGGAAGAAGGTCTATGCAGAGTACAGCAGTTTCCATCTGGAGCCTGAAAGTGAGGCCTTCAGGTTGAGACTGGGCACCTACCAGGGCAATGCCGGAGACTCCCTCACAAGCCACAATGGAAAACCCTTCACAACGCTTGACCGGGATAAAGACGCCTTTACAGGCAACTGCGCTCATTTCCACAAAGGCGGCTGGTGGTACAACGCGTGTGGTCAAACCAATCTGAACGGCGTGTGGTACTCCGGTGGTGTGTATCGCAGCAAGTTCCAAGATGGGATCTTCTGGGCGGAGTATGGAGGCGGGTTCTACTCTCTCAAATCAGTCCGAATGATGATCCGGCCAATAGACTGAGGTTCACCCAGGACCTCACCCTCATATCAAACCCGAATGAGTCTAAATTGCTTGAATGTACTCATAACTCACTTCAGCACTTATTTATAATCACACATTCATGTTTATGAGGATTGACATGTATAGCACAGTATAGTCGTCATTGGTACCAACAGAA

Function

symbol description
angptl1a Predicted to enable signaling receptor binding activity. Acts upstream of or within angiogenesis; hemopoiesis; and positive regulation of Notch signaling pathway. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including digestive system; heart; immune system; integument; and musculature system. Orthologous to human ANGPTL1 (angiopoietin like 1).
angptl1 Predicted to enable signaling receptor binding activity. Predicted to be involved in angiogenesis and transmembrane receptor protein tyrosine kinase signaling pathway. Located in extracellular space.

NR:

description
Angptl1 protein

GO:

id name namespace
GO:0001525 angiogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_03687377_03698806.mRNA True 1983 mRNA 0.51 7 3687324 3698963

Neighbor

gene id symbol gene type direction distance location
CI01000051_03679568_03682342 NA coding upstream 4796 3679437 ~ 3682528 (+)
CI01000051_03457204_03459579 NA coding upstream 227400 3456959 ~ 3459924 (+)
CI01000051_03443548_03451188 NA coding upstream 235510 3443548 ~ 3451814 (+)
CI01000051_03435613_03439371 NA coding upstream 247473 3435613 ~ 3439851 (+)
CI01000051_03431193_03432454 JUN coding upstream 254536 3430291 ~ 3432788 (+)
CI01000051_03800655_03819155 ZYG11B, ZYG11 coding downstream 101692 3800655 ~ 3819197 (+)
CI01000051_04038453_04045552 TMEM30A, TMEM30AA, TMEM30AB coding downstream 339444 4038407 ~ 4046528 (+)
CI01000051_04071144_04075444 KCNK13B coding downstream 372181 4070951 ~ 4077125 (+)
CI01000051_04081532_04085798 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding downstream 382569 4081532 ~ 4085922 (+)
CI01000051_04094412_04101387 CALM2, CALM3, CALM1 coding downstream 395391 4094354 ~ 4101516 (+)
G219176 NA non-coding upstream 34729 3649759 ~ 3652595 (+)
G219237 NA non-coding upstream 39561 3647487 ~ 3647763 (+)
G219210 NA non-coding upstream 85410 3601657 ~ 3601914 (+)
G219195 NA non-coding upstream 91051 3595399 ~ 3596273 (+)
G219203 NA non-coding upstream 93994 3593100 ~ 3593330 (+)
G219249 NA non-coding downstream 9667 3708630 ~ 3709760 (+)
G219303 NA non-coding downstream 79669 3778632 ~ 3782075 (+)
G219253 NA non-coding downstream 111782 3810745 ~ 3825351 (+)
G219314 NA non-coding downstream 133446 3832409 ~ 3832658 (+)
G219316 NA non-coding downstream 136325 3835288 ~ 3835504 (+)
G218981 NA other upstream 440451 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 1621241 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 2962620 637590 ~ 720669 (+)
G217075 NA other upstream 3303196 324465 ~ 384128 (+)
CI01000051_04374052_04393328 NA other downstream 675447 4372658 ~ 4393677 (+)
G219803 NA other downstream 1216011 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 3126836 6825895 ~ 6830637 (+)
G221319 NA other downstream 3643078 7342041 ~ 7342546 (+)
G221386 NA other downstream 3710560 7401175 ~ 7413007 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017219 angptl1a coding NC_007131.7 CM002904.2 15982482 ~ 16007636 (+)