CI01000051_05072860_05074568 (GLRX5)


Basic Information

Item Value
gene id CI01000051_05072860_05074568
gene name GLRX5
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5072629 ~ 5074874 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_05072860_05074568.mRNA
AGATAAAAAGCAACTTGTGTAACCTTCATGACTGACGTATGAATCAACCAATCACAGAGGATATGACAAAGACGAGACCCAATAGCTTTCATCTATTGAGTGTTTATACTAGAAGAGGCGGAGCTTACGTCCAGTGGGTTACTTCGGCGAGGTTCTGTGGAGTCAGTTAAGGGACGTGATAAACGTACATAAACATCTTTAAATCTTCACCAAACCCTTCAGACTTGTACAATGAACAACGTTCTCAGATCGACAGCCCGGTGTCTTCAATCGGGTGCGTGGCATTACAGAACAGCGCAGAATAATGGAGAGCTGCTGTCTGTTTGGGCCCGTCTCATGTGCTCCTCCGCGGCCCAGAAGAACCTGGAGGAGATGGTGAAGAAGGACAAAGTGGTGGTATTCATGAAAGGCACCCCTGCTCAGCCCATGTGCGGCTTCAGCAACGCCGTCGTTCAGATCCTCAGAATGCACGGGGTCGACAACTACGCTGCTTATAACGTGTTGGATGATCAGGATATTAGACAAGGAATAAAGTCGTTCTCCAACTGGCCGACGATTCCACAGGTGTTCTTCAACGGTGAGTTTGTTGGAGGCTGCGATATTCTTCTTCAGATGCATCAGAGCGGCGACCTGGTAGAGGAACTTCAGAAGCTGGGAATCCGATCAGCTCTCCTGGATCAAGAAAAACAGTCCTAGTCAGCAAAGTCACATCTTTGGGATGATTGTCCATTGATGTAAACTTCCCAAAGGTGGACTTGTGAAGGGTGATTTGACCTGCTGAAGTCCAAACTGAAGGATATGATGTCAAACCTCCCAAATCTTGAAAAATCACTGTAAAACACTTGACATAGAATTACCGTATTATACACAATGATTACATTTCTATTGCAGTATGTTTGTCTTTATTTCAGATACTCTAATGTTAGACCACTGCATATTTAAGATGTTGTATTTTGAAATATATTATTACATGTATTTTAGATGTATATCAGTTTTTTGTCA

Function

symbol description
glrx5 Predicted to enable 2 iron, 2 sulfur cluster binding activity; metal ion binding activity; and protein-disulfide reductase activity. Acts upstream of or within hemopoiesis and iron-sulfur cluster assembly. Located in mitochondrion. Is expressed in cardiovascular system; immature eye; intermediate cell mass of mesoderm; and liver. Human ortholog(s) of this gene implicated in autosomal recessive pyridoxine-refractory sideroblastic anemia 3. Orthologous to human GLRX5 (glutaredoxin 5).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K07390 grxD, GLRX5; monothiol glutaredoxin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_05072860_05074568.mRNA True 1002 mRNA 0.43 2 5072629 5074874

Neighbor

gene id symbol gene type direction distance location
CI01000051_04796878_04799272 FLRT2 coding upstream 273308 4796878 ~ 4799321 (+)
CI01000051_04763063_04778692 NA coding upstream 293547 4762496 ~ 4779082 (+)
CI01000051_04419475_04464134 NA coding upstream 608463 4419270 ~ 4464166 (+)
CI01000051_04374052_04393328 NA coding upstream 678952 4372658 ~ 4393677 (+)
CI01000051_04155754_04157992 NFKBIAA coding upstream 914300 4155684 ~ 4158329 (+)
CI01000051_05126681_05142536 NA coding downstream 50877 5125751 ~ 5142617 (+)
CI01000051_05174862_05175926 NA coding downstream 99234 5174108 ~ 5176507 (+)
CI01000051_05254556_05270993 MEIS2B, MEIS2 coding downstream 179682 5254556 ~ 5271828 (+)
CI01000051_05296858_05301152 NA coding downstream 221810 5296684 ~ 5301334 (+)
CI01000051_05314994_05317995 ACTC1B, ACTA2, ACTA1, MGC53823, ACTC1, MGC75582, ACT3, ACTC1A, ACTA1A, ACT2, ACTC1.L coding downstream 239570 5314444 ~ 5318185 (+)
G219806 NA non-coding upstream 492 5071617 ~ 5072137 (+)
G219868 NA non-coding upstream 2721 5069684 ~ 5069908 (+)
G219867 NA non-coding upstream 3348 5069064 ~ 5069281 (+)
G219866 NA non-coding upstream 3909 5068458 ~ 5068720 (+)
G219861 NA non-coding upstream 11971 5060442 ~ 5060658 (+)
G219877 NA non-coding downstream 21104 5095978 ~ 5096200 (+)
G219880 NA non-coding downstream 28653 5103527 ~ 5103756 (+)
G219881 NA non-coding downstream 30048 5104922 ~ 5105147 (+)
G219895 NA non-coding downstream 69797 5144671 ~ 5144882 (+)
G219803 NA other upstream 20596 4914974 ~ 5052033 (+)
G218981 NA other upstream 1825756 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 3006546 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 4347925 637590 ~ 720669 (+)
CI01000051_06825895_06830637 NA other downstream 1750925 6825895 ~ 6830637 (+)
G221319 NA other downstream 2267167 7342041 ~ 7342546 (+)
G221386 NA other downstream 2334649 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 3030769 8209722 ~ 8214696 (+)
G222727 NA other downstream 3268068 8342942 ~ 8343448 (+)

Expression


Co-expression Network