XLOC_009681



Basic Information


Item Value
gene id XLOC_009681
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 7514850 ~ 7515507 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021884
CAAACACTGGAGCGGCAGGAGAGAGAGAAGCAGACCTGAGGATAAAGTGGGGCGTGTGACGGATGGCCCAAGTACTAAAGGAGGAGACGTGGACGCTGAGAGCCAGGGGACAGGGGCAGGTCGAGAGGCTGCTAATCAGAGGGACCCCGCAGAGCACACAAGACCCTAGGCCTGACGCAGGGGCACGATGGCCCCCAGCCTGCTCCTGCCGTGCAGTGTAGACAGTCCCGCTGAGAAAGCAGCGCGCACAAAAGAGCTGCGGCCCGGCAGGGAGCGCAGCGCTGAGCCGCAGATCATCATGAAGAATGGAGACACAATGGAGACAGTTTGACTTTGTTTTTCAAAGTTTGTTCAAGTTGAGACCAAGAACGTTCTCTTTGATTTAGACAAGATGCTTCTAAAAATACTATTTTTGAAACGAAAATGCTACAAAACAGACAAACT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021884 True 444 lncRNA 0.53 2 7514850 7515507

Neighbor


gene id symbol gene type direction distance location
XLOC_009680 atg5 coding upstream 98318 7380463 ~ 7416532 (+)
XLOC_009678 CU466278.2 coding upstream 219897 7227584 ~ 7294953 (+)
XLOC_009679 sri coding upstream 254505 7242610 ~ 7260345 (+)
XLOC_009677 NA coding upstream 282670 7226676 ~ 7232180 (+)
XLOC_009676 bmper coding upstream 319850 7154266 ~ 7195000 (+)
XLOC_009682 CT574585.2 coding downstream 49020 7564527 ~ 7566095 (+)
XLOC_009683 stx12l coding downstream 111028 7626535 ~ 7641367 (+)
XLOC_009684 popdc3 coding downstream 138398 7653905 ~ 7658707 (+)
XLOC_009685 bves coding downstream 147102 7662609 ~ 7681144 (+)
XLOC_009686 ccr11.1 coding downstream 182506 7698013 ~ 7699207 (+)
XLOC_009675 NA non-coding upstream 396282 7118147 ~ 7118568 (+)
XLOC_009668 NA non-coding upstream 1093401 6395303 ~ 6421449 (+)
XLOC_009659 NA non-coding upstream 2012151 5499274 ~ 5502699 (+)
XLOC_009688 NA non-coding downstream 277214 7792721 ~ 7793768 (+)
XLOC_009691 NA non-coding downstream 839972 8355479 ~ 8372570 (+)
XLOC_009696 NA non-coding downstream 1449382 8964889 ~ 8965839 (+)
XLOC_009697 NA non-coding downstream 1450702 8966209 ~ 8966926 (+)

Expression



Co-expression Network