CI01000051_05523573_05525861


Basic Information

Item Value
gene id CI01000051_05523573_05525861
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5523362 ~ 5527007 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_05523573_05525861.mRNA
CTATAAAACCCAAGAAAACATACTCCAAGTGACCAGCTGAGGGAAATGAGTGCCAAATTTAATGTGGCCAGGTTTGTGGGAGAAGACAATGTAGAACATGACTAAATACACATCTAGCTATGTTTTGCTACTGTCATTCCTGTGGCTGTGATGCTTATTATGAAACCTCTTTATTCCCAAGCTCTGGCTTTTCATGAGAACAACACCTCCCATGTGGCTGGGTGCTAGTCTTGTTTCATTTTTAGTCAAAACCTCATTATGGGGCCCTAAAATAGAAGGTAAATACATGAACATCAAACTTCAACATTCAGTGAAGCCGTTCCTACCGGCAGAGATAAAAATCTGCATGGGGTGGAAGATCACTGCAGGCACTCCCATTGATCCCATTGAACTCGCAAATCCTCCATGTGGCCTGGCAAAGGGGCAGCTTAATAAGGGCCTCGTTTTGTCCTTTGTGAGCCAAGGCTGGGGACATCAGCAAAAATGTTCTGATTCAGAAATGCTCCATTTCCTCTGTGGAGATTTGAGGACACTGTGGCTTTTTAAGAGAGCCAAAAATGAAGAACAGAAAGGGGGATTGCAGTTGTGTAATTGCCCTTACATAATCTCGATATAAATTTAATGGATTGGATGATAACCACCATTGACAGTAAACACCATTGTTTGCGGGCTTGTTTTTATGGGAGGTAGGGTCAGGATAGTTCATGTAGCTCAACTTAACCTCATTCTTTGTAGGGTAGACCTCAAGGATTAGAAAGATAAATTCAACTGACAGTCATCTGTCCAGGTCTGACTCAGAGCCTGAAAGTGTAATGCAGAGCCCATTTTACTTTCAGGAGTTTGGGTTTTGGTACCGATATATATGCAATGCCCTCTGCTGAAAGCGGAACACAGTTCTGAGAGTATGGACATTTGCAGCTGTGACGGGATGAGTCATTCTGTTTAGCACTTAAATAGAAAGGGGGTTTCTGTTCAACAATGACACTCACATAAGTACAGACAGAAATCTGCACATGTGCTTATGTGCACGCACACACATACACGACGTCTCAATGGGCGCTGATAAACCAGCACCTGTGAACAGAATGAATCTTAAGAGAAACATGGTTTATGCAGAGGCTTTCGTTTGTTACTTCCATATTCACATGGATGCACGTGTGGCTGGAATACAGAACAGCAGCTGCAGTCCGAGATGTGAGCAGATGACGGTTCCTAGAAGAAAACCCGCCAGTTCTTGCACGTCTTTTATCCAATTGATCAGGCAAGAGGGAAATAATTCACCAGAAATTACCCAACACCTGGGTAAATCAGTAACTGAAAATGAACTGCCTCTCCACAGGAGTTCTCTCAATGTCTCTCTAATATGAACTTGAGGAAGTGACTTACAACAAAACTAAAGCATGAAGTTCAAAGCAGCAAGCAAGTTATGTTTTTGTGACAGTTTGGTCAGGTTCCAATCAAGCTTTTGCAAACCGGTCGGTTCTAAGCCGTTCATCAATGACAATGCAGAACTAAATTTTGCATTAATGCGTTTTTGATAACCTATTCATTGATATTTTTAATGATCCCATATGAGAAACACAAATATAGTTTGAGTGTTTTGTGGGGCAATGTAAAAAAGAGGATGTTTTCTTGTGCTGCTGCTGCTTTCAGCAACTTATTTTCTTCATAAATCATAAAGCTTTTCTTCTAGAGAAAACAAGCAATTACACAACATGAACAAAATGAAACAGCAGTCCAGAAATATGATCTTCCAAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_05523573_05525861.mRNA True 1762 mRNA 0.41 2 5523362 5527007

Neighbor

gene id symbol gene type direction distance location
CI01000051_05514127_05516929 ZFP36L1B, ZFP36L1 coding upstream 5577 5512756 ~ 5517785 (+)
CI01000051_05454570_05480649 NA coding upstream 42427 5454532 ~ 5480935 (+)
CI01000051_05401881_05405868 NA coding upstream 117476 5401881 ~ 5405886 (+)
CI01000051_05320361_05322570 GJD2B, GJD2 coding upstream 199457 5320361 ~ 5323905 (+)
CI01000051_05314994_05317995 ACTC1B, ACTA2, ACTA1, MGC53823, ACTC1, MGC75582, ACT3, ACTC1A, ACTA1A, ACT2, ACTC1.L coding upstream 205177 5314444 ~ 5318185 (+)
CI01000051_05579061_05584087 CRIP2 coding downstream 52054 5579061 ~ 5584087 (+)
CI01000051_05588671_05593438 RDH14B coding downstream 61285 5588292 ~ 5593977 (+)
CI01000051_05657394_05672861 SYT14B, SYT14 coding downstream 130387 5657394 ~ 5674202 (+)
CI01000051_05712567_05728993 YLPM1 coding downstream 185560 5712567 ~ 5729691 (+)
CI01000051_05757566_05757955 C12ORF57 coding downstream 230559 5757566 ~ 5758141 (+)
G220861 NA non-coding upstream 576 5521857 ~ 5522786 (+)
G220856 NA non-coding upstream 24703 5498104 ~ 5498659 (+)
G220850 NA non-coding upstream 33075 5490068 ~ 5490287 (+)
G220846 NA non-coding upstream 37641 5485478 ~ 5485721 (+)
G220844 NA non-coding upstream 39236 5483505 ~ 5484126 (+)
G220889 NA non-coding downstream 44451 5571458 ~ 5571737 (+)
G220922 NA non-coding downstream 149457 5676464 ~ 5676963 (+)
G220930 NA non-coding downstream 212572 5739579 ~ 5740171 (+)
G220916 NA non-coding downstream 214051 5741058 ~ 5744465 (+)
G220923 NA non-coding downstream 262521 5789528 ~ 5830106 (+)
G219803 NA other upstream 471329 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 1148032 4372658 ~ 4393677 (+)
G218981 NA other upstream 2276489 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 3457279 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 4798658 637590 ~ 720669 (+)
CI01000051_06825895_06830637 NA other downstream 1298792 6825895 ~ 6830637 (+)
G221319 NA other downstream 1815034 7342041 ~ 7342546 (+)
G221386 NA other downstream 1882516 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 2578636 8209722 ~ 8214696 (+)
G222727 NA other downstream 2815935 8342942 ~ 8343448 (+)

Expression


Co-expression Network