CI01000051_05743847_05749675 (BPNT1)


Basic Information

Item Value
gene id CI01000051_05743847_05749675
gene name BPNT1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5743671 ~ 5749675 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_05743847_05749675.mRNA
CAAGGTGTGCTTTCTATTTCAGCTAGTGTCATGGCGAGCAGCCCTGCAGTGCTTATGCGTTTGGTGGCTTCAGCCTATGCCGTGGCAGAAAAGGCTGGAACTATTGTCCGGAAAGTGCTGCAAAGTGGAGAGCTTGGTATCGTTGAAAAGACAGGAGCTGATGATCTACAGACACTGGCTGACAGGCTTGTTCAGAAGAGTATATGTGCATCCCTGTCGAAAAACTTCCCTAAAGTCACTATCATCGGGGAGGAGGAATTACCAGCTGAGTCTGCTGAGGAAGACCTGATAGAGAACGGGCACAGCAGCCTAATCGTACAAAAATCCTGTCCCGATCAGTATGCCAGCCTGAAGGAGGAAGAGCTGGTTGTGTGGGTGGACCCTCTTGATGGCACTAAAGAATATACAGAAGCTGCAAGGGTTTTGTACAACCCAGTTTACATACAGAAGCCAGTGCAGCCCCACAGAGCCCCTTACCGGCTTTTGGATCATGTGACAGTGCTAATAGGGATTGCTTATGGGGGGACAGCCATTGCTGGAGTCATCAATCAGCCCTTCTACAACTACCAGATAGGGGCTGGTGCTTCTTTGGGCAGAACATTATGGGGAGTTCTGGGTTTGGGCGCATTTGGGTTTCAACTCCAGGAAGTCCCAGATGGTAAAAGAATCATCACAACCACACGTTCCCATAGCAATAAACTTGTGACCGACACAGTACAAGCTATGGAGCCTCATGATGTCATCAGAGTGGGAGGAGCTGGGAATAAGATCATCCAGCTAGTGGAGGGAAAGGCCTCCGCTTATGTGTTTGCCAGTCCAGGATGTAAAAAGTGGGACACTTGTGCACCTGAGGCAATTCTGCATGCAGTTGGAGGCAAACTGACAGACATCCATGGTAATGCATTCAGATATGATGCCAATGTGAAGCACATGAATTCTGCTGGAGTTCTGGCGACACTAAAGGATCATCAGTACTATTTAAGCAGAGTGCCACAGGCTGTCCTACAGGCTCTTCCCTCTGACTAAACCATTACAGGATATGAAGTCATACTCTAAACATTTGTGCCTCAAAGCTGTGATATGTCTTTGCCATAAAATATTCATTCATCTGAAAATGTTCTTAGATTTAACTGTTTAAGATTAATAAGATTTCATTATTTACTGAGTACATTCACATGTTTTTTATTAGGGGACCAAATAAA

Function

symbol description
bpnt1 Predicted to enable 3'(2'),5'-bisphosphate nucleotidase activity. Predicted to act upstream of or within inositol phosphate dephosphorylation and phosphatidylinositol phosphate biosynthetic process. Is expressed in intestinal bulb. Orthologous to human BPNT1 (3'(2'), 5'-bisphosphate nucleotidase 1).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K01082 cysQ, MET22, BPNT1; 3'(2'), 5'-bisphosphate nucleotidase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_05743847_05749675.mRNA True 1202 mRNA 0.46 9 5743671 5749675

Neighbor

gene id symbol gene type direction distance location
CI01000051_05690134_05690418 NA coding downstream 53253 5689547 ~ 5690418 (-)
CI01000051_05679116_05685755 KCNK5B coding downstream 57715 5678771 ~ 5685956 (-)
CI01000051_05646139_05649781 5NT1A, NT5C1BB, NT5C1A coding downstream 93723 5645678 ~ 5649948 (-)
CI01000051_05595595_05606236 NA coding downstream 137419 5595037 ~ 5606252 (-)
CI01000051_05545276_05570550 RAD51B coding downstream 173121 5545059 ~ 5570550 (-)
CI01000051_05752434_05755144 NA coding upstream 2615 5752290 ~ 5755144 (-)
CI01000051_05949486_05950751 KCNS3B coding upstream 199668 5949343 ~ 5950853 (-)
CI01000051_06015846_06019716 RD3 coding upstream 266032 6015707 ~ 6019716 (-)
CI01000051_06033224_06041180 SLC30A1A coding upstream 283367 6033042 ~ 6041180 (-)
CI01000051_06041891_06047349 NEK2 coding upstream 291944 6041619 ~ 6047710 (-)
G221735 NA non-coding downstream 39504 5703909 ~ 5704167 (-)
G221717 NA non-coding downstream 92571 5650870 ~ 5651100 (-)
G221716 NA non-coding downstream 100078 5643314 ~ 5643593 (-)
G221715 NA non-coding downstream 105826 5637590 ~ 5637845 (-)
G221714 NA non-coding downstream 106743 5636372 ~ 5636928 (-)
G221742 NA non-coding upstream 9438 5759113 ~ 5759335 (-)
G221744 NA non-coding upstream 12976 5762651 ~ 5762972 (-)
G221745 NA non-coding upstream 18696 5768371 ~ 5768592 (-)
G221780 NA non-coding upstream 105997 5855672 ~ 5909748 (-)
G221804 NA non-coding upstream 198745 5948420 ~ 5948656 (-)
G221575 NA other downstream 224847 5513952 ~ 5518824 (-)
G220041 NA other downstream 1585568 4155730 ~ 4158103 (-)
CI01000051_02955633_02960400 SCRN2 other downstream 2782177 2955380 ~ 2961148 (-)
G218861 NA other downstream 2903039 2840270 ~ 2840632 (-)
G218728 NA other downstream 3197212 2527343 ~ 2546459 (-)
G221840 NA other upstream 383098 6132773 ~ 6133579 (-)
G222729 NA other upstream 2592474 8342149 ~ 8342652 (-)
G222730 NA other upstream 2593295 8342970 ~ 8343438 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location