CI01000051_05752434_05755144


Basic Information

Item Value
gene id CI01000051_05752434_05755144
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5752290 ~ 5755144 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_05752434_05755144.mRNA
TGAGCGTGGGCTGCTGTGCTGGGGCAGAGGCCATGCCGGCTCACTCCACGGGGAGATTCACTACTGATGACTGCAATGGCAAAACGGAAAATTTGATAAATTATACATTGCTGACATTATTACCTGATCACAGCCTCTCCTGTGACGCGGAGTCGCGCACACTTCCGGTCGGTACAGCCATAAAAGTGTCCGTGGGCAACAACAACCAAAGTGAAATGAAAGCAATAAGCGATATGTCTCCGGCAGTGTCTACTGATACAACAGAGCTGAAGCCTAACACCTGTCCTCAGAGTCCACACAAAGAGCATCTGGCTCTTAACTATCTTACCCTGTTTAAAGTGCTGCTGTGGCTTGTGCTGTTGGGGCTTTTTTCAGAACTTGAGTTTGGCCTGCCATTTTTTCTCATATCATTATTCTACTGGCTCTATGAAGGCCTTCGAAGCCCAAAAGCCAGACAACCTGGAGAAATGAGTGCATACTCTGTGTTTAACCCTGATTGTCAACCCATTCTGGGGACTTTAACAGCCGAACAGCTGGAAGGAGAGATGGGATACAGGCCGATGGCCAATAGATGAACGTGTTTGAAAGGCATGCAAACTTTGCAGCCAACTGTATGGACAACAAGGAAGACAGTCTAAATGTGGACTTGGGGAAACGTATTTGCATTATATTAATGTATCTCGGTTCTTTAATGGTTTACTCATATTTACATAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_05752434_05755144.mRNA True 719 mRNA 0.45 4 5752290 5755144

Neighbor

gene id symbol gene type direction distance location
CI01000051_05743847_05749675 BPNT1 coding downstream 2615 5743671 ~ 5749675 (-)
CI01000051_05690134_05690418 NA coding downstream 61872 5689547 ~ 5690418 (-)
CI01000051_05679116_05685755 KCNK5B coding downstream 66334 5678771 ~ 5685956 (-)
CI01000051_05646139_05649781 5NT1A, NT5C1BB, NT5C1A coding downstream 102342 5645678 ~ 5649948 (-)
CI01000051_05595595_05606236 NA coding downstream 146038 5595037 ~ 5606252 (-)
CI01000051_05949486_05950751 KCNS3B coding upstream 194199 5949343 ~ 5950853 (-)
CI01000051_06015846_06019716 RD3 coding upstream 260563 6015707 ~ 6019716 (-)
CI01000051_06033224_06041180 SLC30A1A coding upstream 277898 6033042 ~ 6041180 (-)
CI01000051_06041891_06047349 NEK2 coding upstream 286475 6041619 ~ 6047710 (-)
CI01000051_06052696_06090422 LPGAT1 coding upstream 295909 6051053 ~ 6090422 (-)
G221735 NA non-coding downstream 48123 5703909 ~ 5704167 (-)
G221717 NA non-coding downstream 101190 5650870 ~ 5651100 (-)
G221716 NA non-coding downstream 108697 5643314 ~ 5643593 (-)
G221715 NA non-coding downstream 114445 5637590 ~ 5637845 (-)
G221714 NA non-coding downstream 115362 5636372 ~ 5636928 (-)
G221742 NA non-coding upstream 3969 5759113 ~ 5759335 (-)
G221744 NA non-coding upstream 7507 5762651 ~ 5762972 (-)
G221745 NA non-coding upstream 13227 5768371 ~ 5768592 (-)
G221780 NA non-coding upstream 100528 5855672 ~ 5909748 (-)
G221804 NA non-coding upstream 193276 5948420 ~ 5948656 (-)
G221575 NA other downstream 233466 5513952 ~ 5518824 (-)
G220041 NA other downstream 1594187 4155730 ~ 4158103 (-)
CI01000051_02955633_02960400 SCRN2 other downstream 2790796 2955380 ~ 2961148 (-)
G218861 NA other downstream 2911658 2840270 ~ 2840632 (-)
G218728 NA other downstream 3205831 2527343 ~ 2546459 (-)
G221840 NA other upstream 377629 6132773 ~ 6133579 (-)
G222729 NA other upstream 2587005 8342149 ~ 8342652 (-)
G222730 NA other upstream 2587826 8342970 ~ 8343438 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017149 si:ch211-59d15.9 coding NC_007131.7 CM002904.2 9124369 ~ 9125663 (+)