CI01000051_05831209_05933202 (DLGAP2)


Basic Information

Item Value
gene id CI01000051_05831209_05933202
gene name DLGAP2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5831209 ~ 5933637 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_05831209_05933202.mRNA
ATGGATTATGGTCCCTGGGCATTATGTAAGAGGAGATTTAGCACTAAAGACCAGCAGTATTCCCCCTGGTCACCATCCAGAGATTTCAATGAGGATAGTAGCCTCGCTCCACCCAGGAACATGAAGGGCTTATCAGGTGGTCGTGCGCCGCACCAGATTCCCACACTGCCCCCGTGTGGACTGGCGGAGTGCGAGCATCTCCATGACCTGCACGGCATGCATGTGTCCGATCTACGCCACTCCTACCTGCTCAGCCCCACGGAGACCTGCGTCATGGACTTCCATCACCGTCTTTCCCCCCGCAGCTCCATTCACTCTGATTGCATGATCATGTCACCCATGGTGCTACCTTCCACTGCCCCTGCCGACCATGTCTCCAGCAGCACCTTTCCCAGAATGCACTACAGTTCACAGTACTACGACCCAGCTGCCCGGGAAGACTGTGCAGCCATCACCACCTCAGCCACATCTGCTGCCGCCGCTGCTGCAACATCTGCCTCTCACCACGGCAGCAGCAAGAGCAACCGCATCCCCGCAAACCTGCTGGACCAGTTTGAAAAGCAGCTTCCGCTTCATCGCGACGGCTTCCATACGCTGCAGTACCAACGCACATCTGCCGCCACTGGAGGGGAACAGCGCAGCGAGAGCCCCGGTCGTATCCGACACCTGGTGCACTCCGTCCAGAAGCTCTTCACCAAGTCCCACTCACTGGAGGGATCGTCCAAGATGAATGGCACTAAAGGTGACAGTGGAGGTGGGGGAAGCCATCACCATCACCATGGCAATCATCACTCATCCAAGCACGGCAGCAAGCGCAGTAAAAGCAAAGAGCGCAGGCACCGGTCGGGGACAGGAGGATGGTGGAGCTCGGATGACAACCTAGACAGCGACAGCACCTACCGCACGGCCAGCGCTTTGAGCCGCCACCATCATGAACACGTCGGTCACAGTTTCCCAGAATCCATGCACACTCACTTTGGAGACCACTCGCTCAAAACCTCCAAAAGCAACAATGACGTCAAGTGTTCGGCCTGTGAATCCATGGCACCTGAGGGAAAGTTCATGAAGAGGAGTTCCTGGTCAACACTTACTGTCAGCCAGGCCAAGGAGGCTTATCGAAAGTCCTCCCTTAACCTGGAGAAGCCCATGATGCATCAGGACTATAAACCATCATTCCGGTCCACACACTACCTACAGGTGCCTCAGGATGAGTGGGGGGGTTATCCAGGGATTGAGAGGGATGACGAGATTCCGTGTCGCCGGATGCGGAGCAGTAGTTACGTCAAAGCCATGGGAGATGATGATAGTGGTGAGTCTGATACCAGCCCCAAGACGTCACCTCAGAAGACTGTGCGGCCCGATGCCCTTGTCCTCAAATCAGCCTTGCAGAGGCCACATATAGACACCCAAAGTTTGGACCTGGAGGTGATAATGAAGGAAGTGTTTATATACCTTAGGCTTGTACAGATTAGGAAAACTGGGCAAATACCCCTACTCCTCATCTGTCGCCCCTCCAGTTTGGCTTGGAGCCCGGGCTACCACTTGCAAACAGCGAGAGATATGCGCCCTCACCCCAGCGTGTCTCTGGACCCAGCAACCAACTTCAACCCTCCACAGTTTCGCTCCAGAAACCAGAGCTACATGCGTGCAGTCAGTACCTTCAGTCAGGCAAGCTGTGTCAGCCAGGTGGTTGACACCCCCAAATTACCATTTGACAGGACCAATGAGACCCCGTATTTGGTCACCCTGGTTATAGCTGTTCTTCAAACAATCTGCTTTTCTTTATTTACCAATTATGAGATGATATTCCAGCCTGAAATGTTTTCTCTTATCTTGTTGCTTTTTGACATAATTCTACTGAGACGTTCAAGGGGAAGAATCAAAGTGAGAAAGAGAAAGGAAGAGGAAAAATTAAGGACTGCTATTCCTGTTTTTGTCTCTCAGGTGAGTGAGACTGAGGTCAATGGCCAGTTTGAGTCAGTTTGCGAGTCCGTTTTTAGTGAAGTAGAATCCCAGGCCGTGGAGGCCTTGGACCTGCCCGGCTCTTTCCGCACTCGAAGCCACAGTTACCTGCGTGCAATTCAGGCTGGGTATTCCCAAGATGACGACTGCTTGCCTTCAATGACATCTTCTACTGTCACTTCAACTCTCAGATCCACAACAGAGGGTTATGATGCAATGGAGGGCACCTCATTGCTAAATGAGGAAATGATTGAGGACGATGATGGCGCCAGCTCCTCAGCTTATCAAGAAATCGAGAGGTTTGAAAGAGAAAATGCTGCACGTAGTCAACACAGTACCAGTTCCACGGTCACGGCTATCTCTGTCCCTCCAACCTCCTCGCATGCCTACCGAGTTCCATGTCCGCCCCCGTCCCAGCCCCCACCAGATCCTCCCGTCCCACAGGCTATTCAGGCTTTCAAGGAGTCGGCAAACATGGTGGCTGCCTTCAACATGCAGTGGAAAGAGGAGATATCAGCAATGCGCTATGAGCTAGCGGAGCTACGCAGGGATGTCTGCGGAGAGCTCAAGACTTTCAACAGCAACTTCTTTAATTTTACCCAGTGCTATAACATGTGGACGATGTGCCGGGAGGCTGCCACCGGCACCAGTTCCACTCAGTCAAGCGAGAGGGTGTCCGTTGGCGTCCAGACTGGCGCTAACGGTCTGGTGAGACAAAATACTGCAGACGCTTCAGTAATGTGTCAGCCCGAACCGGCTGCCTTCAATATTTTTGACCTTATGGAGCCTCCACGCATTGAGATCACTGAGGGAACTCCTGAAGGAACAACGGCCACCAACAGCCCAACCAGCCCTGCCAGTCCTGATAGACCCACCACCGGCCCACCGTTGACCAAGCCGCTGGGAAGATCCAAATTAGACACTGGCAGGAAGAAGAAGAACTGCAGTCGAGCGGACGGTCAAAGAAGTGCCAGCCTTGAACTCTGCAATGGGAGTCAGGCACCTGCCCCTCTTGGTTCAGGTCCCAAATCTGCTGAGGTGGCACAGCGACTCAAAACATGGGTGTCGCAGATGGAGCTGGTTGATGAGACTGATCTTGCCAAGTTCCTGTATAGTTGCCAAACGGCAGTAACATATACACCTGGCTACAAGAAGACTCCTCCACCTGTTCCTCCTCGTTCCACCACTAAGCCGCTGATTTCCGTAACAGCCCAAAGCAGCACAGAGTCTACGCAAGACGCATACCATGAAGGTCGGCTGCCACGCGGAGGACTTTGGTCACAGGACAGCCTTGGCCGGGTTATCTACAACTCCACCGACAGTCTGGACAGCGCTAAAGCAGTGACCCTAGCAATGGAGACCGCTTCCAAGCGCCTCACATCTGCAGGGAGCTACAGCTCTGTTCAAACCTGTGATAAGGCCATCCTGGTGTCCAAAGCAGAGGAATACCTCAAGACTCCACGCTCTTCCATCGGGATACAGGTGGAAGCGGCCACAGATTCTGAGACAGATAGTAAAGGTCTCCCGCAGTATCAGTCCGTGGGTATCCAGGTAGAGGATGAGAAGAGGCTTGGGCGCTTTAAACGGTCTAACAGTGTGACAACGGCAGTTCAGGCCGATTTGGAGCTGGAGGGGTTTCCTTCGACTGAAGACAAGAGTCTGCAGTTTGGAGGATTTCAGCGGCATTCTGAACCCAGTACGCCTACACAATATAATGTGGTTCGGACCGTACGCACACAGGGCCTCTTCAGCTACCGTGAGGACTACCGGCCCTCCAGCGGACCACCCAGCCCACAGCCCGAACCCTGGCTGGTGGAACCCACTCATGAAACAGCCGAATCTGGCCGTGTGTCGCCGCTCCGCCGTGATGGCAGCTGGTTCATGCAGCTTCTGCACAGCGAGACCAAACGTTTGGAGGGATGGTGCAAAGATATGGAACGTGAGGCGGAGGAGCATGACTTATCGGAGGAGATTCTTGGGAAGATCCGGAGTGCTGTGGGCAGTGCTCACCTCCTCATGTCCCAGAAATTCCAGCAGTTTTACTGGTTGTGTCAGCAAAATCTGGACCCCAGTGCAATGCCCCGCCCCACAGCTCAGGACCTGGCTGGGTTCTGGGATCTCCTGCAGCTCTCCATCGATGATGTCACTGCCAAGTTTGATGAGCTGCAGCAAATCAAGAGCAACGAGTGGAGGATAGTGGAGAGTCCAGAGAAGAAGGAAAGAAAATGGCCACCTCCTGTTACAAAGAGGCCTCCTAAAGGTCGCGGAGCTGTTACGCGTGAGCGCTCCTTGGATCTGCAGGACAGACAGAGGCAAGAGGCCCGCCGCAGGCTCTTGGCTGCTAAACGGGCTGCGTCTTTCCGTCAGAACTCAGCTACAGAGCGGGCCGACAGCATAGAGATCTATATCCCTGAAGCCCAAACCCGTTTATGAAACACACAAATGCTACGCCTCACCAATGCGCTTCACCAACAGGGTACATCATTCAGCTCCATGTCACTGCTCCACCCGTACACATTCTCACGTGTTACACATATTCTTCCTCTGCTCATCATCTACTCTGAGCTGAGAATAGTGGTGAGTTTATATATGCCTCAAACAGAGCTCAATGCAAAAAGGTCAAGGCAGTCTATGTCCTCCAAGACCTGCAGCTACTGCAACCCAGTTTGGATTTCAGTTTTAGTACGTTTAGAGGACAAAACTAAGGCTTTGTTCACACTGCACACAAATTCAATTTGGTTTCCACGTCCAATTTTTAGGACACAATTCTTATATTCGCTTTCATGCACATAATGAGTCCAAAACCACTCACTATTCACCACATAGTGAATGTTCTGTAGCCCATAAAAGAGACATGGTTATGGGGTA

Function

symbol description
dlgap2 Predicted to enable molecular adaptor activity. Predicted to be involved in regulation of postsynaptic neurotransmitter receptor activity. Predicted to be located in plasma membrane. Predicted to be active in glutamatergic synapse and postsynaptic specialization.

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_05831209_05933202.mRNA True 4830 mRNA 0.53 17 5831209 5933637

Neighbor

gene id symbol gene type direction distance location
CI01000051_05757566_05757955 C12ORF57 coding upstream 73068 5757566 ~ 5758141 (+)
CI01000051_05712567_05728993 YLPM1 coding upstream 101518 5712567 ~ 5729691 (+)
CI01000051_05657394_05672861 SYT14B, SYT14 coding upstream 157007 5657394 ~ 5674202 (+)
CI01000051_05588671_05593438 RDH14B coding upstream 237232 5588292 ~ 5593977 (+)
CI01000051_05579061_05584087 CRIP2 coding upstream 247122 5579061 ~ 5584087 (+)
CI01000051_05935542_05939529 NA coding downstream 1806 5935443 ~ 5939632 (+)
CI01000051_05955881_05966250 NA coding downstream 21780 5955417 ~ 5966425 (+)
CI01000051_05969849_05970699 NA coding downstream 36212 5969849 ~ 5971469 (+)
CI01000051_05996289_06007664 RHAG coding downstream 62358 5995995 ~ 6008558 (+)
CI01000051_06113450_06128623 TAGAPB coding downstream 179813 6113450 ~ 6129084 (+)
G220923 NA non-coding upstream 1103 5789528 ~ 5830106 (+)
G220916 NA non-coding upstream 86744 5741058 ~ 5744465 (+)
G220930 NA non-coding upstream 91038 5739579 ~ 5740171 (+)
G220922 NA non-coding upstream 154246 5676464 ~ 5676963 (+)
G220889 NA non-coding upstream 259472 5571458 ~ 5571737 (+)
G220920 NA non-coding downstream 11953 5945590 ~ 5946344 (+)
G220983 NA non-coding downstream 56169 5989806 ~ 5990114 (+)
G220967 NA non-coding downstream 81536 6015173 ~ 6016182 (+)
G220991 NA non-coding downstream 85684 6019321 ~ 6019978 (+)
G220993 NA non-coding downstream 87266 6020903 ~ 6021164 (+)
G219803 NA other upstream 779176 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 1455879 4372658 ~ 4393677 (+)
G218981 NA other upstream 2584336 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 3765126 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 5106505 637590 ~ 720669 (+)
CI01000051_06825895_06830637 NA other downstream 892162 6825895 ~ 6830637 (+)
G221319 NA other downstream 1408404 7342041 ~ 7342546 (+)
G221386 NA other downstream 1475886 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 2172006 8209722 ~ 8214696 (+)
G222727 NA other downstream 2409305 8342942 ~ 8343448 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location