CI01000051_05935542_05939529


Basic Information

Item Value
gene id CI01000051_05935542_05939529
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5935443 ~ 5939632 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_05935542_05939529.mRNA
TTATAAAACCTATTACACTAGGGGAGAGGCACTTCTTAATAAAGGCACTTCTTCCAGGCCCTGCTATAATATTGAACATGGGTCTTACTAGAGAGGCCTATGAAGCACCCATCCAAAAGGGAAGCATACATCCCTACTTCCAACACCCAACAGTACTTGAAGAGCGAGGGGTACCTACTAAGGAACTCATTCACAGGGGAGCATAATTCTACTTTAGACCCTAAGATAGGAGAGAACATAGCTCAACCCTGGAAAAAGATACTTTCAGGATATCAGGGTGGAGCGAGATGTCTTCGAGAGACAATCAACCTCTGCCCACAGCCACCGATCACTGCCACTCTCACATTGGGGGGCAGCACTATAAACCACCTGTGGACTTTTTTAAAGGGAGGTTTAACAGTGTCTCAATGCATCTCGGATTATCGTATTTATGGTCACTGGTTTGTTGAAAAGATATACTTTTATTTTAGGTTAGACATTTATGTTTTTTGTATATCACACTTTTCGGTCCAGCATTTGCACAAAGATGTGCCCATTTGCCTTGACATCTTTGAGAACAGAAACCCGGGCCTAACTATCCCAGAGATGGCCGTTTGCTACGTCACTAGCTGTATTGTCTATCCTCTTAGCATAACTGCTGCTTACATTCATAAGTTGTTAGAAAGCAGCAAATAAATCCTTGGCTTTTTAGCTATTTCCTTTACCTGGCAGCCTTACAGCATCTTAAGCAAAAAGCGTTGTGAATGTATGCCCTGCTCTTGCAAAAAAAAGTAAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_05935542_05939529.mRNA True 778 mRNA 0.42 4 5935443 5939632

Neighbor

gene id symbol gene type direction distance location
CI01000051_05831209_05933202 DLGAP2 coding upstream 1806 5831209 ~ 5933637 (+)
CI01000051_05757566_05757955 C12ORF57 coding upstream 177302 5757566 ~ 5758141 (+)
CI01000051_05712567_05728993 YLPM1 coding upstream 205752 5712567 ~ 5729691 (+)
CI01000051_05657394_05672861 SYT14B, SYT14 coding upstream 261241 5657394 ~ 5674202 (+)
CI01000051_05588671_05593438 RDH14B coding upstream 341466 5588292 ~ 5593977 (+)
CI01000051_05955881_05966250 NA coding downstream 15785 5955417 ~ 5966425 (+)
CI01000051_05969849_05970699 NA coding downstream 30217 5969849 ~ 5971469 (+)
CI01000051_05996289_06007664 RHAG coding downstream 56363 5995995 ~ 6008558 (+)
CI01000051_06113450_06128623 TAGAPB coding downstream 173818 6113450 ~ 6129084 (+)
CI01000051_06136031_06140543 RSPH3 coding downstream 196399 6136031 ~ 6140633 (+)
G220923 NA non-coding upstream 105337 5789528 ~ 5830106 (+)
G220916 NA non-coding upstream 190978 5741058 ~ 5744465 (+)
G220930 NA non-coding upstream 195272 5739579 ~ 5740171 (+)
G220922 NA non-coding upstream 258480 5676464 ~ 5676963 (+)
G220889 NA non-coding upstream 363706 5571458 ~ 5571737 (+)
G220920 NA non-coding downstream 5958 5945590 ~ 5946344 (+)
G220983 NA non-coding downstream 50174 5989806 ~ 5990114 (+)
G220967 NA non-coding downstream 75541 6015173 ~ 6016182 (+)
G220991 NA non-coding downstream 79689 6019321 ~ 6019978 (+)
G220993 NA non-coding downstream 81271 6020903 ~ 6021164 (+)
G219803 NA other upstream 883410 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 1560113 4372658 ~ 4393677 (+)
G218981 NA other upstream 2688570 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 3869360 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 5210739 637590 ~ 720669 (+)
CI01000051_06825895_06830637 NA other downstream 886167 6825895 ~ 6830637 (+)
G221319 NA other downstream 1402409 7342041 ~ 7342546 (+)
G221386 NA other downstream 1469891 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 2166011 8209722 ~ 8214696 (+)
G222727 NA other downstream 2403310 8342942 ~ 8343448 (+)

Expression


Co-expression Network