CI01000051_06332084_06361639 (PPP2R5A)


Basic Information

Item Value
gene id CI01000051_06332084_06361639
gene name PPP2R5A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 6331867 ~ 6361847 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_06332084_06361639.mRNA
ATTTACACGTCACCAAATTATCGCAGGATACCTGTGGATTTTTGGAGTACATGCAGCCTTCGTGATTGGTTTGGCAGTGCGTTTCATTAGATGGGGTCTCGTGAGTTTGATGTACAGCACAGTCAATGGGATGTCAGTCAGACTAGAAAACATTTAGGGCACATACAGACACTGTAAACGCAGCTCATTGGCTAGACCTGCTTTGGAAATGTCGGCGATATCTGCGTCCGAGAAAGTAGATGGATTCACGAGGAAATCGGTGAGGAAGGCTCAGAGACAGAGGATTTCTCAGGGCTCGTCTCAGTTTGCGGCCAACAGCAGCAGGCCTGCGGTTCCGGAGATCTCTGCGCTCCCGCAGCTCAAAGATGCATCCTCCACAGAGCAGCATGAGCTGTTCATGCAGAAATTACAGCAGTGCTGCGTAATATTCGACTTCTACGACACGGTGACTGACCTAAAGAGTAAAGAGACCAAACGGGCCACTCTCAGCGAACTCGTGGAATATGTGTCCACTAACAGAGGCGTTCTGGTGGAGCCTGTCTACCCTGAGATCACCACCATGGTTAGCACAAATATTTTCAGAACGCTTCCACCTAGTGATAACCCAGACTTTGACCCAGAAGAAGATGAACCCACTCTAGAAGCCTCCTGGCCTCACATGCAGTTGGTGTACGAGTTTTTCCTTCGATTCCTAGAAAATCCAGACTTCCAACCAAGTACTGCCAAACGTTACATTGACCAGAAGTTTGTGCTACAGCTCTTAGAACTGTTTGACAGTGAAGATCCTCGTGAGAGAGAGTTTCTAAAAACAATTCTTCATCGCATCTACGGGAAGTTTCTGGGTTTGCGTGCCTTTATTAGGAAACAGATCAACAACATTTTTCTGAGATTCCTCTATGAAACTGAGCACTTTAATGGAGTTGCTGAATTCCTTGAGATTCTGGGCAGTATCATCAATGGCTTCGCTCTGCCGCTGAAAGCTGAACACAAGCAGTTCCTCATGAAGATCCTCATTCCCCTGCACACTGCCAAAGGACTAGCACTGTTCCATGCACAGCTGGCCTACTGTGTGGTTCAGTTCTTAGAAAAGGACCCGACCCTCACTGAAGTGAACAGGTACTCATCCCACTCTTCCTCTGACACCACAGAGTGTGAAGATGCTGAGAGGCTTCTGGAGGTTCGGCTTGGTGTCTGGTTTTCGAGCCATCTGCGTTCCCATGGAGTGTGTTTTTCAGCCATTGTGATTATACGGCTGCTGCTGTGTTTGGTTGAACAGTCATGCGTGAACAGTGACTTGATTTTGAGGATGGTGGTTCGTGGCCTTCTGAAATTTTGGCCTAAGACATGTAGTCAGAAAGAGGTCATGTTTCTAGGAGAAATCGAAGAGATCCTGGATGTTATTGAACCCACTCAGTTCAAGAAGATTCAGGAGCCTTTATTTAAGCAAATCTCTAAATGTGTAGCCAGCCCTCATTTTCAGGTAGCAGAACGAGCACTGTACTACTGGAACAATGAATACATTTTGAGTCTAATCGAGGAGAATAATGCCAAAATCCTTCCCATCATGTTTGGAAACTTGTACCGGATCTCCAAAGAACACTGGAACCCGACGATCGTGGCCCTGGTGTACAATGTATTAAAAACACTGATGGAGATGAACAGCAAACTGTTTGATGAACTGACAGCCTCATACAAATCTGACAGACAGCGTATTTTGCTGGTTACAAATGTAAACCAGTCTAGAGAGCAGTAAAGGATATGGACCTTGAGCAATAATCTTTACATTTTTAAACAAGAACTTTTCTTTTTCCGAAAGCCTATGTAAAACTAAATCAAAATGCTATTTTCTCCTGGTAAAGGATAATATATTTTATGTATGTAAGTCTATTTTGGATGTAAAGTGTGGTTATAGTAAATTATACATTTTTGTCTAATCAAAGATGTAAGGTTTTCACCTACACTGCAAAAAA

Function

symbol description
ppp2r5a Predicted to enable protein phosphatase activator activity. Predicted to be involved in protein dephosphorylation. Predicted to act upstream of or within signal transduction. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol and nucleus. Orthologous to human PPP2R5A (protein phosphatase 2 regulatory subunit B'alpha).

GO:      GO:0008601, GO:0000159, GO:0007165

KEGG:

id description
K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_06332084_06361639.mRNA True 1970 mRNA 0.44 14 6331867 6361847

Neighbor

gene id symbol gene type direction distance location
CI01000051_06201120_06284027 ENPP1 coding downstream 47083 6200459 ~ 6284784 (-)
CI01000051_06189714_06192740 NA coding downstream 139127 6189612 ~ 6192740 (-)
CI01000051_06175507_06185039 NA coding downstream 146828 6175479 ~ 6185039 (-)
CI01000051_06052696_06090422 LPGAT1 coding downstream 241445 6051053 ~ 6090422 (-)
CI01000051_06041891_06047349 NEK2 coding downstream 284157 6041619 ~ 6047710 (-)
CI01000051_06366293_06372185 DTL coding upstream 4271 6366118 ~ 6372185 (-)
CI01000051_06423541_06426013 NA coding upstream 60249 6422096 ~ 6427613 (-)
CI01000051_06739181_06742303 PLVAP, VSG1 coding upstream 376942 6738639 ~ 6742303 (-)
CI01000051_06803307_06824913 GNPAT coding upstream 441460 6803307 ~ 6824913 (-)
CI01000051_06837978_06881158 TRIM67 coding upstream 475567 6837414 ~ 6881706 (-)
G221858 NA non-coding downstream 136972 6194660 ~ 6194895 (-)
G221837 NA non-coding downstream 229865 6101722 ~ 6102002 (-)
G221836 NA non-coding downstream 231104 6100559 ~ 6100763 (-)
G221830 NA non-coding downstream 313897 6017633 ~ 6017970 (-)
G221825 NA non-coding downstream 344735 5984363 ~ 5987132 (-)
G221890 NA non-coding upstream 34934 6396781 ~ 6396987 (-)
G222054 NA non-coding upstream 301761 6663608 ~ 6689905 (-)
G222137 NA non-coding upstream 401343 6763190 ~ 6763420 (-)
G222173 NA non-coding upstream 611235 6973082 ~ 6994996 (-)
G221840 NA other downstream 198288 6132773 ~ 6133579 (-)
G221575 NA other downstream 813043 5513952 ~ 5518824 (-)
G220041 NA other downstream 2173764 4155730 ~ 4158103 (-)
CI01000051_02955633_02960400 SCRN2 other downstream 3370373 2955380 ~ 2961148 (-)
G218861 NA other downstream 3491235 2840270 ~ 2840632 (-)
G222729 NA other upstream 1980302 8342149 ~ 8342652 (-)
G222730 NA other upstream 1981123 8342970 ~ 8343438 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location