CI01000051_06423541_06426013


Basic Information

Item Value
gene id CI01000051_06423541_06426013
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 6422096 ~ 6427613 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_06423541_06426013.mRNA
ATATTCTTTCAGGGCATAATGACCTACTGTAGTTTTGCTGCAGATACAGTTCTCATCAGTAGACCTGTCCTCAGGCATGTGGAATCTCATATCTGAAACTTTATTTACTCCTTCAGCAAAGTCAAACCACTGAAGACTGAGGTCGACTTGACCAAGAGAAGTATGTGCTGTTGTTAAAACTGAATGATGTATTTCATCATTAGCGAAAAGCTGAACCTCCTTTCAGATCCTTGTGAGCCAGTAATCTGACTACATCAAGCAAAATGGATTTCTTATAATGGATGACAATGGAAGAGTATATTTAATATATATATTAACTCTATCGGGGATATCTGTTTGACAACCAATGAAAAATGGAAAAACTAGAGTTTACACACTTGAGCTTTATAGGAAATATTACCATCAGTTGTTTTTCTTTTAATTACAAATATTTGGAATATTTGCAATTATTTACCAGCAGATGGCAGCCTTCCTTATTGTTACACTCTGTTATTCACAGACTCCATTTCCCAGAACTCTCTGCTCATTATTAGTTTATCAGTTTCAGCTGTGTCTTGTTTAAACCATGTCATTAACTCTGTCTAGGTTTTGTATCAGTATGAGGTCTTGTTTTGTGTTACTGACAGTTTTCTGAGTAGTTTTGTTGTTTCTGGTTCTGATATCTGCCTTGTCTTGGATTTGGACTGATAACTAATGAAGCCTCATGAAGCACTGAGGCTTTCCCCTCATTGTTCCGGGAAAAGATTCAAAGCTTCAAGAGTGTCGAAAACAGTGGCATCTGGTGTTTAGTAAAAAGTAAAGCAGCCAAAACCCTGTGAAACAAGCTTCGTCGGACAAAGCAGCCGCTATACAGTTTCATGTTACGTGCTCAAATAAAAGCCTAATAGTGCGTGCGTTTGTGTGTTGAATTTATCTCTGTGATAAATTCATTTACTCATTAAATTGTGACATTTAATGCCAGTATGAATATCAATATGATGTAACAGAAGAATAATGTACATTGTACATATATGAATTGCATATGGCAAATATTTTATTTTCCTGAAATAATTTGTATTCCTCATATTACTTGTATGACTGGGTATTTAAAAATGTAATTGAATACGTCTGAAAGTGAATCGCACATGTGATTGGACAGAAAGTGAGGCTTTGTTTGTCAGTGGTCACGTGATTTTTACGTTACCAACACAAGCCTTGAATCGAGGCTTCGTCTGGCACGCCTATTTATTTTCTCATTTAACTGCACGTGGATCCTCACTCTCTGTGCTCAGTGCTGTCCTTTTGTAACAGAAGACTTCATCAAATATGGATCCAGCAGTTGAGTTAGTCCGCATGCGCCAAGGTAACCTCAAAGAGCACATTCAGATTTTCCTGGACATTGCAAATGTTTCTAAACTGCCAGATTGTGCTCTCATTGACTTTTTCTGTTACGGGCTTAACCTTCCGCTCAAGGACAAGTTAATCCATGCTGCTCCTCGAGGGTCGTTTAGTGAATTTCTGGACTATGCACTGTTAAGTGGATCCCCTTTCACCGTGGGAGTGGTTGACGGGGACGCTTCACGAACATTTTTTGGGAGGGGGCTACGGGAGACAAGCTTCGATGGCCACGGAGCTTGGCCAGCACTTTCCATCTGCGCCCACTCTAATGCTAACAACACCAGTGATTACAACGCATGCCAGTGCAGTCATGTCAGAACTTATAACCGTCAGCGCAGCCATGCCTGAGCTCCCAGCAGTCAGGATCGCCAACCCAAAGCCTCTAGTTAAGGATGAGACCTTTCCGTCTTTAGCGGTCATGGACACCATCCCTGTGTTCCCGGGTGTCGTCGACGCTGCGATTGAGGACGCCAAGGCCTTCTATCCACATTGGGGTTTGATAGCTAAATTGGCAGATCTGCCTCTGAGAACAGTCAGAAAACCTGACTTTCCTAAGCCACTATCCTTTAGTATTCCTGCTGACACTTCTCTGGTCCCCGAGGTCATTCTGCCTTCCTCTGTGCTTTCAATGATGGCAGTGGCGTTTTGGTGCGTTTGGGTGACGCTCGTCGAAGTGGCTTTGAACAAGACTGTTGTATCATCTGTGGACTCTGAACCTGCACCTGTCCACGAACCTGACACAAAGCCTACTCCTGAGGTCAGTTCAGATCTTGTACTTCCTTTTGAATACTGCCTTGTGTCTACGTTGGTTAACTCTGCCACTCCAGTCACTAATGTGGATGTCAAGTCTGTATGCCCTGTCAGTTTTGAGAAGTCTACCTGGCCCTGGTTTGCTGCTGATCCGCTTTGGGAATTTCTGCATCCATCTGCCTGGCTCCGTCTGCCCGGCTCTTTGAGCGCCAACGCAGGATGGATTGAAGTCTGCTCTAATGCCCATGACAGCAAGTTTCAAATTGCAGAGCAGAGGGAGTGAGGGAGCAAGAGATCTCAGATTATACAGCAAGTGTTCTGAAATACTTCCTCTAATTCCTGTATCAGTTTTATGCCGTGGCCCTTTTGACTGTGTTCCGCTGGAAGATGACAAAGCCGCTTTCGTAAGGAACACCTGGAACCTTCAAATTATCAAGTGAGAAAACAACAGGACAGTCTGACACAATTGCGGTTGATGATGAAATTGGAAAAAGCTCTTATGGTTATTAGTGGGACACTTTATCTGTGTTGTGACAGACAGTATGAGTAGGATGTGGACCATTCATAGAAAAACTAATAGAATTCCTGCCTTTCAGTTAAAATAGCCAATCACTTTTCTGTTAACACCTCTAGCTGTAGCAGCATGACTATATATATATATACACACACACACATCAGGGAGCCGCTATCAATATGCAATTTTCACTTTTGAATTCGTGATTTACAAAATAAGATACTTGTCAATGACGCTGAGGATCTGTTGCGCACCAAATTCTCTGCCATCGTCCTGTCAGTCATCTCCCCTTACTCTCGTCACATGATAAGTAAAATCTGTATATATCAAAAAAGTTCATCAAAGTTGTCCTAAAATCTTCTTCTTAGGACAATTAATTCTTAGGACAACTTTGATTAACTTTTTTGATCCACTTCAAATGTTGAATACTGTATATATATATATATATATCTGTATCTGTATATATACACGGCCCAAGATGGCCACTGAGTGAACCGACTACAAGGGACTTTGGTGTAGTTCAAGTCACAAAGATGCAGGTAACTAGAAAACACTGACAGGGACAAACTATCACTTACAACATCTCAGTTACAATGAACTGATAGAGGAGAGTTTGGGTCACCAGAAAAGAATCACTTACTTTGTAGAAGACAGCAATGGACTTTCAGACACCCCTCTTTCAGGGGAAAATGCACTGTCATGCTATACAATGGAATCCCAAGACAATGTTTCAGACATGTCAATCTTTCTTTCTGTTCTCTAATCATTTGAACTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCAATATCCAAAATTCATGTTCTTGAGGGGAATCTTTTGGTTCACATGAGGAAAACAGCTTATAAATCATACTACCCATCATTTTTCTTTTTTTTTTTTTTAATGAAATAATTCAGAAAGTTTTCTGTGATGGGTAGGTTTTAGGGTTAGGGGATATAATTTAAAGCTTGTACTTTATAAAAATCATTATGTCTATGCAATGTCCCCATAAAACATGAAAAAAACAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTAAACTGAAACACAATGCTGACAGAAAGAACATTAGCATCCAATGCTTCTCCATTCTTCCAGCATTGCAGTGTGCCAAAAATGTAAATAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_06423541_06426013.mRNA True 3855 mRNA 0.41 3 6422096 6427613

Neighbor

gene id symbol gene type direction distance location
CI01000051_06366293_06372185 DTL coding downstream 49911 6366118 ~ 6372185 (-)
CI01000051_06332084_06361639 PPP2R5A coding downstream 60249 6331867 ~ 6361847 (-)
CI01000051_06201120_06284027 ENPP1 coding downstream 137312 6200459 ~ 6284784 (-)
CI01000051_06189714_06192740 NA coding downstream 229356 6189612 ~ 6192740 (-)
CI01000051_06175507_06185039 NA coding downstream 237057 6175479 ~ 6185039 (-)
CI01000051_06739181_06742303 PLVAP, VSG1 coding upstream 311176 6738639 ~ 6742303 (-)
CI01000051_06803307_06824913 GNPAT coding upstream 375694 6803307 ~ 6824913 (-)
CI01000051_06837978_06881158 TRIM67 coding upstream 409801 6837414 ~ 6881706 (-)
CI01000051_06884323_06886377 EXOC8 coding upstream 456395 6884008 ~ 6886639 (-)
CI01000051_06910132_06916487 NA coding upstream 481827 6909440 ~ 6916487 (-)
G221890 NA non-coding downstream 25109 6396781 ~ 6396987 (-)
G221858 NA non-coding downstream 227201 6194660 ~ 6194895 (-)
G221837 NA non-coding downstream 320094 6101722 ~ 6102002 (-)
G221836 NA non-coding downstream 321333 6100559 ~ 6100763 (-)
G221830 NA non-coding downstream 404126 6017633 ~ 6017970 (-)
G222054 NA non-coding upstream 235995 6663608 ~ 6689905 (-)
G222137 NA non-coding upstream 335577 6763190 ~ 6763420 (-)
G222173 NA non-coding upstream 545469 6973082 ~ 6994996 (-)
G222190 NA non-coding upstream 583420 7011033 ~ 7011313 (-)
G221840 NA other downstream 288517 6132773 ~ 6133579 (-)
G221575 NA other downstream 903272 5513952 ~ 5518824 (-)
G220041 NA other downstream 2263993 4155730 ~ 4158103 (-)
CI01000051_02955633_02960400 SCRN2 other downstream 3460602 2955380 ~ 2961148 (-)
G218861 NA other downstream 3581464 2840270 ~ 2840632 (-)
G222729 NA other upstream 1914536 8342149 ~ 8342652 (-)
G222730 NA other upstream 1915357 8342970 ~ 8343438 (-)

Expression


Co-expression Network