XLOC_009686 (ccr11.1)


Basic Information

Item Value
gene id XLOC_009686
gene name ccr11.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 7698013 ~ 7699207 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019421
TTCCTTCCCATCCTGTACAGCATAGTGTTCATCATTGGCATCATTGGGAATGGTCTGGTCGTGTGGGTCTTCATAAGATGTCGTCAAAAATCCAACATGACAGACGTGTGCCTCCTCAACCTAGCCCTATCTGACCTACTCTTCCTTGTGTCACTTCCATTTTGGGCTCACAATGCCATGAATCAGCGGACTTTTGGCAAGTTTATGTGTCACACCATCACAGGTCTCTTCATGATTGGTCTCTACGCCAGCATCTTCTTCATGGTTCTCTTGACGCTTGATCGCTATGCCATTATCATTCATCCCAACTGTATGTTCTTCAGAAACCGCTCTGCAAAATTGGGTTTGGCCTTGTTGGTATGGATGCTCAGCCTGTTGGCGTCCTTACCTAACATCATTTTTGCCAACGAGAAATTTGATTTAAACCACATAAAATCCTGCCAACCTGATTTTCCTGACAATACATCCTGGATGTCCTTCACTTACATTAACATGAACCTTCTGAGCTTGATTTTCCCTCTGATTATCCTGATCTTTTGTTATTCCCGGATTATCTCTACTCTGTTCAGAATGAAATCAGAAAAAAAGCCCAAACTGGTCAAACTGATCCTGGCTGTGGTAACGGTTTATTTTCTCTTCTTTACCCCATACAACATTGTCATATTTCTTCTGTTCCTGCAGAGAATGGAGTACTTCTTTTCTTGCGAGTGGCATATTGATTTGAGTCTTGCCATGCAGTGGGTGGAAACCATCGCCTTGAGTCACTGTTGCCTCAACCCAATCATCTATGCATTTGCCAGTCAGCAGTTCAGAGGAGCAGTCAAAGATCAGTTTCCATTGTGTTTCAGGCGATACGCAACTGTCTCTCAACAGGCATCTGAAAGAAGAAGCTCAATCTTCTAAAGATCTTCTGAATATTTGACCACAAAAATTACATAAAGCAAAAATGTTCCTTTAGAGATTTTTATTTTCCAGATTAAATGACCTTACCTTTTTACCAACACCAAGTTCCCCATAGTAATGAATCTATATCGAGTTCACTTTTAAAGTTGTCAATTTAGTTAAGAATAAGCTTGTagaaaaaaatacacaacttGATATTTAGCATGTATAATACTCCTACAATAGATTTGatacaaatatgcaaattataaaaataacttgTCATAAGAAGTTCATGTAGTTTGGTTTTAAA

Function

symbol description
ccr11.1 Predicted to enable chemokine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and chemotaxis. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0006935 chemotaxis biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004950 chemokine receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070302-5 Predicted to enable chemokine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and chemotaxis. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000070755

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019421 True 1195 mRNA 0.39 1 7698013 7699207

Neighbor

gene id symbol gene type direction distance location
XLOC_009685 bves coding upstream 16869 7662609 ~ 7681144 (+)
XLOC_009684 popdc3 coding upstream 39306 7653905 ~ 7658707 (+)
XLOC_009683 stx12l coding upstream 56646 7626535 ~ 7641367 (+)
XLOC_009682 CT574585.2 coding upstream 131918 7564527 ~ 7566095 (+)
XLOC_009681 NA coding upstream 182506 7514850 ~ 7515507 (+)
XLOC_009687 cnot10 coding downstream 4327 7703534 ~ 7730836 (+)
XLOC_009688 NA coding downstream 93514 7792721 ~ 7793768 (+)
XLOC_009689 ano10a coding downstream 286679 7985886 ~ 8041348 (+)
XLOC_009690 pomgnt2 coding downstream 440308 8139515 ~ 8162380 (+)
XLOC_009691 NA coding downstream 656272 8355479 ~ 8372570 (+)
XLOC_009678 CU466278.2 non-coding upstream 403060 7227584 ~ 7294953 (+)
XLOC_009677 NA non-coding upstream 465833 7226676 ~ 7232180 (+)
XLOC_009675 NA non-coding upstream 579445 7118147 ~ 7118568 (+)
XLOC_009696 NA non-coding downstream 1265682 8964889 ~ 8965839 (+)
XLOC_009697 NA non-coding downstream 1267002 8966209 ~ 8966926 (+)
XLOC_009699 CR394537.2 non-coding downstream 1537925 9237132 ~ 9237246 (+)

Expression


Co-expression Network