CI01000051_06966165_06969998


Basic Information

Item Value
gene id CI01000051_06966165_06969998
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 6966093 ~ 6970217 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_06966165_06969998.mRNA
ACTGGAAAGGTAATGGGAAAAATCATGGAAACGTCCATTTATTTATTTGTTTTTGCTTGCATGTGTCCAAACAGTTACGTTATACCCAAATGTAACATTTTAAAGATACATTTTTTATCTAACAAAAGAGTTATTTTGGTATAAAATAAAATAAAATAAAAGTCTTTTGTGTACGTCAGCGTCTGTTGTCCAGCTGTTGAGGAAATGGCGGCCGCAGCGATGGCAGGGGCTGTGGCGGATCCTCCGCACGTTACGGAGGCCAAAAAGCTGGAGTATTTCTCCTCCATCAACTCCATGGCCCGTAAGATTATGCAGGAGAGGGAGAAGATAAAGGAGAGGTACGGTTCGGCTTGGGATCAGATGAGCCCGGTCGAACAAGACACGGCGATAGACAACGGGATGATGGATCCGCGGATCCGGGCTCGGTATGCCATGCACCGGGTGGACCGAGATGAGGTGATCTGCTACCCGAAACTACTTATCCAGACCGGACAGAAGACCGTACACTTCGGAGAAGAGGACTTAACTTGGCAAGATGAGCACTCGGCTCCCTTCTCTTGGGAGACCAAGAGTCAGATGGAATTCAGCGTAATCTCCGGTGCAACAGAACCGGCCGTTCCCTCCTCCGTGAACGAATCCAAACCCAAGACCTCTCAGGGTACCAAGCTGCCCAGCAATGATGAGTCCTCCTTCTGGAAGATCAGTGCTGAACGCTCTAGGCTAGAGGGCGAGAAGGCTGAATTTCATTCTCTGACTCCCAGCCAGATCAAGTCTTTGGAAAAAGGCGAGAAGCCTTTGCCCTCGTACCTGAGGCCGGAGTCTGGGCCGAGGGAGTCAGAGGAAGCGCCCGCCCCACGGCCGGTTAAACAGAGAGCCTCCAAACCTCATGCTCCTCCTCCGCCCATTCCCATCAGTGTGACCCCTGTGGCTATTAGTGTGACCCCCACACCTCCTGCTCCTGTGTCCTCATCAGAGGAAGGGTGGGAGAGGGCCCAGAGCACCCTTCCCTCTGTCAGCAGCACTATGGATGATGTGTTCAGTCCTGGTCTGGTCACCAGGTCTTCCTCTCAATCCAACAGCACAGTCAAAGATGCCGACAGGGCAGATGCCTCGCCGACCTCCAGTCCTACATTCTCACAGTTCAACACAAGCAGTAGTATCCTGAAGACTGGATTTGATTTCTTGGATAACTGGTAACACCCGAAGAACCCATTCCAGATCATAGGACCTACAAGCACCACAAACACTACAGAACACTTTCCTTTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_06966165_06969998.mRNA True 1269 mRNA 0.51 4 6966093 6970217

Neighbor

gene id symbol gene type direction distance location
CI01000051_06958650_06963551 CLEC11A coding downstream 2272 6958572 ~ 6963821 (-)
CI01000051_06910132_06916487 NA coding downstream 49606 6909440 ~ 6916487 (-)
CI01000051_06884323_06886377 EXOC8 coding downstream 79454 6884008 ~ 6886639 (-)
CI01000051_06837978_06881158 TRIM67 coding downstream 84387 6837414 ~ 6881706 (-)
CI01000051_06803307_06824913 GNPAT coding downstream 141180 6803307 ~ 6824913 (-)
CI01000051_07218226_07226180 CHRNA4B coding upstream 247925 7218142 ~ 7226726 (-)
CI01000051_07288569_07296096 ELOVL1B coding upstream 317868 7288085 ~ 7296096 (-)
CI01000051_07403086_07404051 NA coding upstream 431850 7402067 ~ 7404784 (-)
CI01000051_07410144_07439528 MAST3, MAST3B coding upstream 439246 7409463 ~ 7439528 (-)
CI01000051_07580256_07582183 NA coding upstream 610024 7580241 ~ 7582183 (-)
G222137 NA non-coding downstream 202673 6763190 ~ 6763420 (-)
CI01000051_06739181_06742303 PLVAP, VSG1 non-coding downstream 211825 6738639 ~ 6742303 (-)
G222054 NA non-coding downstream 276188 6663608 ~ 6689905 (-)
G221890 NA non-coding downstream 569106 6396781 ~ 6396987 (-)
G221858 NA non-coding downstream 771198 6194660 ~ 6194895 (-)
G222173 NA non-coding upstream 2865 6973082 ~ 6994996 (-)
G222190 NA non-coding upstream 40816 7011033 ~ 7011313 (-)
G222194 NA non-coding upstream 43888 7014105 ~ 7014311 (-)
G222195 NA non-coding upstream 46742 7016959 ~ 7051677 (-)
G222243 NA non-coding upstream 141397 7111614 ~ 7112897 (-)
G221840 NA other downstream 832514 6132773 ~ 6133579 (-)
G221575 NA other downstream 1447269 5513952 ~ 5518824 (-)
G220041 NA other downstream 2807990 4155730 ~ 4158103 (-)
CI01000051_02955633_02960400 SCRN2 other downstream 4004599 2955380 ~ 2961148 (-)
G218861 NA other downstream 4125461 2840270 ~ 2840632 (-)
G222729 NA other upstream 1371932 8342149 ~ 8342652 (-)
G222730 NA other upstream 1372753 8342970 ~ 8343438 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00003692 NA coding CM030121.1 CM030121.1 15006417 ~ 15016678 (-)