CI01000051_07215332_07217167


Basic Information

Item Value
gene id CI01000051_07215332_07217167
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7215332 ~ 7217708 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_07215332_07217167.mRNA
ATGACTCAGACAGAGGAACACACAGGAACAACAGGAAGCAGCACGGGCGATATCCAGCAACGATCTGACAAACATGGGACGAAAGACAGGGCAATAAATAGGCTGGTAGATGACATTCAGCTGCCGCTGATCACTGGTAATCAGCGGTCAGCTCATCCACCAGTGAAACTGGTTGACCAAGCTAAAGGTCAGACACCAGCACACCCTCATCCAAAACATGAAAGAGAGCAGACTGGTCATTTCAGCATGCAGGGTAAAGGGGATTTCCCTCTTGAAATTGAGGATTATCCACTCCAGTCCTGGTCAGCTCATCCACCAGTTGAGAGAAGAGAAGGGTATTATAGCAGATTTTCCTTGACAGGTATTTCGGTATTACCTTTCGGAAGATGTTTCATCACTCATCCATATGTCTTTTCAATCGACATCTTAACGTTCAGTTACTAAATCATTACTGACATTTAATAATGATAATTTTCAAATATTTTAAACGCTGTCATTTTTCCTGCTATAAATAGCCCCTGAAAACATTTAATTTGTTGAAAATAACCTTAGAACATTATTTATGGACATACTTTTTAAGTATTTGTTACAAACTGTTACCAAAATATGGACATAAATAGTGTCGGTACAATTTCACAAATGTAAGATGGACCTGATTCTTTTGACATCTTCAGTTTGAAATATTTCAGAGTTTGCAAAAGTGAATAACTGAAATGCAAGCAGACCTTGAGAAATTATGAATTCATATCACACTCAGGACAGACTTGAACACACCATTTCACAATTTTATCTGCTGTCACCTGTTACCTTTCACAGCTGAAAGAAGTCATTCTCATATACTGAAATCCATGTGCTGTGATGCAATACTTAGAACAGAGAAAATTATTCATGTGAATAATTTAAATCTGTTCCAGTGTAAACCATTAAGTTAGATTTATTCTTTATGTTGACGTCTGTGTTTTTATATCAGTGGGTTTAGTATTCA
>TU251008
CAGGAAGCAGCACGGGCGATATCCAGCAACGATCTGACAAACATGGGACGAAAGACAGGGCAATAAATAGGCTGGTAGATGACATTCAGCTGCCGCTGATCACTGGTAATCAGCGGTGACGCCCACATGAAACAATCAGCGTGACGAACACACACACACACACAAACACACAAGACCAGAATGAGACAGCGGATTACCAACCGTGACAGTACCCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_07215332_07217167.mRNA False 985 mRNA 0.37 4 7215332 7217708
TU251008 True 217 lncRNA 0.51 1 7215363 7215579

Neighbor

gene id symbol gene type direction distance location
CI01000051_07170752_07194524 NA coding upstream 20808 7170752 ~ 7194524 (+)
CI01000051_07125875_07127476 CLDN20 coding upstream 87485 7125875 ~ 7127847 (+)
CI01000051_07081085_07109551 TIAM2 coding upstream 105726 7081085 ~ 7109606 (+)
CI01000051_07015896_07020569 NA coding upstream 194718 7015383 ~ 7020614 (+)
CI01000051_06985393_07011299 CNKSR3 coding upstream 203929 6983354 ~ 7011403 (+)
CI01000051_07253002_07255432 PTGFR coding downstream 34493 7252201 ~ 7255620 (+)
CI01000051_07259968_07261598 BT3L4, BTF3L4 coding downstream 42010 7259718 ~ 7261731 (+)
CI01000051_07267084_07283654 ZFYVE9B coding downstream 49303 7267011 ~ 7284015 (+)
CI01000051_07287140_07287867 NA coding downstream 69432 7287140 ~ 7288035 (+)
CI01000051_07337005_07340657 MOB3C, MOB3C.S, MOBKL2C coding downstream 119145 7336853 ~ 7340692 (+)
G221283 NA non-coding upstream 7759 7207371 ~ 7207573 (+)
G221280 NA non-coding upstream 53965 7161166 ~ 7161367 (+)
G221256 NA non-coding upstream 63237 7043663 ~ 7152095 (+)
G221254 NA non-coding upstream 267437 6947384 ~ 6947895 (+)
G221208 NA non-coding upstream 303621 6847641 ~ 6911711 (+)
G221351 NA non-coding downstream 5009 7222717 ~ 7222987 (+)
G221353 NA non-coding downstream 7182 7224890 ~ 7225167 (+)
G221360 NA non-coding downstream 30462 7248170 ~ 7248498 (+)
G221316 NA non-coding downstream 67279 7284987 ~ 7285294 (+)
G221365 NA non-coding downstream 67788 7285496 ~ 7285769 (+)
CI01000051_06825895_06830637 NA other upstream 382264 6825895 ~ 6830637 (+)
G219803 NA other upstream 2163299 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 2840002 4372658 ~ 4393677 (+)
G218981 NA other upstream 3968459 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 5149249 2060534 ~ 2062355 (+)
G221319 NA other downstream 124333 7342041 ~ 7342546 (+)
G221386 NA other downstream 191815 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 887935 8209722 ~ 8214696 (+)
G222727 NA other downstream 1125234 8342942 ~ 8343448 (+)

Expression


Co-expression Network