CI01000051_07403086_07404051


Basic Information

Item Value
gene id CI01000051_07403086_07404051
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7402067 ~ 7404784 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_07403086_07404051.mRNA
AATGATTATAATCATAATCATAATCACATATAATCGTGTGATGCTGACGCAGGAGCTGGCCAATAATGAGTCGCGTTCTGATTAGAACCTGGAAAGCGCTGCACTGTGTTTACTACCTGAACAGCGTAGGAGACTGACATGGAAGAGAAGAACTTGAATAAATTACCACCTCGGGTGTGCATTATTTTCTAATAATTCAACGGCCAGTCGCCAATTATTCCTTACGTTCCCTTGTTTTAATTTAGTTAAATCATGGCTATGTTTTAACTAAAATGAGGGAATGAATTAGCACAACATAGCCACAGTTTACCTAAAATGAGGGGACGAATGAATAAATCATGGGAATGAATTCTTAATTTCTATGTCCTGTGCGAGGCTCCGTACATTACGGATCTTACCTAATTTTTTTTGTAACATAGGCCTACTCCATGAAAGAAAGATGCACACATTTAACATTTCCCACATGGGAAAAACCCCTACTGGCCTACACATATGGCTACAAATGCCAAATATCTTTTATTGTTGGATCTTTTGGTAAAGTTACCAGATTCACATCTTTTATCTATGTTAATGTTTAACTTGACTTGTCACATTGTTTGCTTTTGTACGGATTAAACCGTGTACTTTAGCACTGTCCTTTTTGGCCATTTCAAAACATCTGGTCTCAGTTCCACTGCACAAGTATCTCTTCATGTTTGACCTACTAAGAAGACCAGAATAAAACATTTTAAAGATGGGAAATCATCCCTGCACCCCAACTCCAGCAACTATAGACAGTATTTACAAGGTTGCCCAGGACAATGGGATCCTCCCTGACATCACTCTTGATGGGACGGTGGCAAATTTACTGTCCCTCAATTCCAGCATTGCGCTCAACCTGCAGTATGCGGCCGTCCAGCAGAGCCTGACCACAGACCAACTGGCGGCTTTAGACACCAACCTGACCTCTATTTTCGGACAGAGCTCTAATGTATCTTACGGAGGTGTCGGAGTTGTGGCGCTTGCTTTATCTTTTCTGCTTGAAGCTCTTGTGTCCAGTATTGTCGGTCAGACGGATGGTGGGACCACAGACCCATTTAAGAAGGCTTTTGGATCAGATAACTCTTCGGAAATCGCCAGCATTGCGAGTGAATACCTCAAACTGGTGTCTAAGAGGGCCAATAACATCGAGGAAATGGGAGAAATAACTGAACTCTATGACCAGAAACTGAAATATGCTCTAATCGAGCTCTATGAGAGCATGACTTTGGATCAACAGCTGAACACGGATAGTATTAAGCAGTGGATCAATGGAGCTGCGATCCACCTGCACATGAGGATTCATGGGATTCGTTTAGCATCTGTCCCTAAAGGTACAGCTGAATCGCTGCGTTTGTCATACCGAACAGGTTTGGCGAGGTTAATTCAGCTCTATAATGGTTACTTGAGGCAGTATGTAAGAGAGCGGTCCACCACGCAAGTTCCTCCGGTAAAGGCGGGATTCTTAATCGTTGAACCTGGTAAGAAGGTTAGACACCGTGTGGTCCACAACACCTGCCAATCACAGGCTATTGCCACTGCGGTAGTGGCCCGAATTTTATCTGCACAGGATATTGGAAAGACAGAAAGATTTTTTGATGAAGCTGGTCAAATCTTAGACCGCTTGCTTCAACAGAGAGACACTTTTGAGCTACACAGGCAACAGAAGATTAAATCTTAACTGGATGTGGAATTCCTTCTGAGGTGATTTTTACTAATACTATATACTCTGTTGTTTAAACACATTGTTAAACTACGCCACATTTTAGAATAGCTACATCTCTGCTGTTTTTAAGTTTGATACCATTGCCATGATATGCTAACTACGGTAAGTGCTGGATGTATTAGCATTAGCCTACTTAATGTCCCCTTGTGGTGAAAATCAGGTTTTTAATGTTGTTCATATGTCTATCTGGTGTTTTTAACATGCTTTAAGACAAACCATGTGCAAATTCATAAGTCGACACCATTGCTGAGTATTTTGTCTTTAAAACTGCAGTAAACCAAAGACAGTCTCAAACCCGCGGTTTGAAATCGCTGGTGTTTCTAAAGTCACAAAAACTACCTTGTAACCAATCACGTCAATGTGCCGGCGGGCTTTATCATATCATTACTGACCACGCAAGGGAGTCTCAAAAGAAGGTTATCCCGGTATATTTTTCTGTTGATATGAAAAATCGGGTAGATTTAGCAATATGGCGGGTGTGTGATGTATCTTACGATGTTATCATGAACTATGCCTTTCTCCACTGACATTCTGAGTTGTTCAAAGCTGTCTGACTCGTGAATGTGAACATGGTTTGTGTAACATTAGCAACACATTATTAGCTGTTTGATAACGTAGTCAAGCAAAACTCTAATCATATTAATTACCGTTATGTGTCCGACATTGTAAAAAGCGCTACCATTGTGCAGCGTTTACCTCAGTAAGTTGACGGAGTGGATCTCGTCTGAGCTCGTGCGAGTGAGTGGAGGCGGGGCTAATTATCATATTCATAGATCCGTGTATATTAAATGAGGCAAGGGTGTAGAGTTACATTCAAGTTATTTTAAGGGATTAATTTTTTTTTTTTTCTTTTTTTTTTTCTCCACAGGAAAAAAACGTTTAAATATGTAATTTTGGTGATCAAAGATGAGTTTTAAAGGATAAAATGATTGACTACAAGGGGACTTTAATGAAACAGCTTACCGAATAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_07403086_07404051.mRNA True 2718 mRNA 0.40 1 7402067 7404784

Neighbor

gene id symbol gene type direction distance location
CI01000051_07288569_07296096 ELOVL1B coding downstream 105971 7288085 ~ 7296096 (-)
CI01000051_07218226_07226180 CHRNA4B coding downstream 175341 7218142 ~ 7226726 (-)
CI01000051_06966165_06969998 NA coding downstream 431850 6966093 ~ 6970217 (-)
CI01000051_06958650_06963551 CLEC11A coding downstream 438246 6958572 ~ 6963821 (-)
CI01000051_06910132_06916487 NA coding downstream 485580 6909440 ~ 6916487 (-)
CI01000051_07410144_07439528 MAST3, MAST3B coding upstream 4679 7409463 ~ 7439528 (-)
CI01000051_07580256_07582183 NA coding upstream 175457 7580241 ~ 7582183 (-)
CI01000051_07584669_07585335 NA coding upstream 179571 7584355 ~ 7585335 (-)
CI01000051_07618053_07621854 NA coding upstream 213258 7618042 ~ 7621854 (-)
CI01000051_07836858_07853522 TMEM259 coding upstream 432041 7836825 ~ 7854111 (-)
G222370 NA non-coding downstream 26077 7375718 ~ 7375990 (-)
G222262 NA non-coding downstream 31067 7366892 ~ 7371000 (-)
G222363 NA non-coding downstream 44682 7357149 ~ 7357385 (-)
G222361 NA non-coding downstream 45755 7356103 ~ 7356312 (-)
G222356 NA non-coding downstream 59539 7342108 ~ 7342528 (-)
G222378 NA non-coding upstream 53458 7458242 ~ 7458443 (-)
G222379 NA non-coding upstream 54318 7459102 ~ 7461790 (-)
G222386 NA non-coding upstream 62647 7467431 ~ 7785815 (-)
G222383 NA non-coding upstream 63775 7468559 ~ 7506222 (-)
G222287 NA non-coding upstream 385594 7790378 ~ 7844010 (-)
G221840 NA other downstream 1268488 6132773 ~ 6133579 (-)
G221575 NA other downstream 1883243 5513952 ~ 5518824 (-)
G220041 NA other downstream 3243964 4155730 ~ 4158103 (-)
CI01000051_02955633_02960400 SCRN2 other downstream 4440573 2955380 ~ 2961148 (-)
G218861 NA other downstream 4561435 2840270 ~ 2840632 (-)
G222729 NA other upstream 937365 8342149 ~ 8342652 (-)
G222730 NA other upstream 938186 8342970 ~ 8343438 (-)

Expression


Co-expression Network