CI01000051_07611022_07612093


Basic Information

Item Value
gene id CI01000051_07611022_07612093
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7610449 ~ 7612093 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_07611022_07612093.mRNA
GTATATATATCTTTATAAAGAGGAAGTGAGCGACAGATATTATTTATATAGAGAAAAATAGATGATTTCCTAAGGTCAGTTCTAACTCCGAAAAGCTGCTGTATGTGTTTGTGTGACTAAAAGGGGAATGGACACTTCATGCTTGGCAAAAGTTCAGGAAACACTGAGTTGCTTCTGTACCGAGCCTCTTAACATTTTTTTTTTAAAAAAAGGTAACGCTCTGCCAAGAGCTGGGAACCCTGCCAAAACACTCCCCAGAACCGAGGAATGGAAACTGAAACACACTCTTTCACTAAAAACAGGAGGGAGGTGACTTTTGGTTTTCCTAGTAACGGCAAGGATAACCTCTAGCTGTCACGTTGCAGCAAGCTGTGTGTTTGGAGTGTGGAGGAACTGGACGGCAGGTCCCAACATCAGGAGCAGAGCCACTCCCCTTTCCTGAGCTGAGCTTGGAGGGGAAACCCACGCTTTAAAAGTTTCATTTCACTTAGAAGAGAGTCTCTCGCTGGACTCACACCCACCAGCCTATTCTTTTCGGACATCTCCAACCTGAAAGTGACCGTGTGCCTCAGGATGGCAAACTCCAAATCTTCTCAGACTACTCGTAACATTGTGATCGCCTGCCTGGCCCTGTGGTCGATCATCTCGATTATTATTATTGTGGTATGGGCCACTTCGCCTGATATGAAAGAAGCCAGTCAGTGTCGCAAGGAGATGCAAACTCTAACGGTGAAGCATGACAAGGAAAAAGTCGTGTGGGTCAAAAACCAAAGAGCCCTCGAGGAGCTGGTGAGACAGGGATGGAGGAACCAGACTACCCTACAGAAGCAAATCGACCAGAACAAGGAGCAAATACAGAATCTGAATTTGTCTTTGAATGACAGGTTGCAAGAAATTACCATTCTGACTGGAAACATCACAATTTTGGAGAGCAAGATTGAGGAATACAAACTCATCGAGGGAAACCTCACTACAGAAATCAGCCTGCAGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_07611022_07612093.mRNA True 994 mRNA 0.45 2 7610449 7612093

Neighbor

gene id symbol gene type direction distance location
CI01000051_07542167_07549737 ARRDC2 coding upstream 59789 7542167 ~ 7550660 (+)
CI01000051_07534938_07540104 NA coding upstream 70031 7532639 ~ 7540418 (+)
CI01000051_07507549_07530087 HOMER3 coding upstream 80362 7507549 ~ 7530087 (+)
CI01000051_07470914_07489207 LRP1AB, LRP1 coding upstream 121207 7470914 ~ 7489242 (+)
CI01000051_07391277_07399712 ABCB11B, ABCB11 coding upstream 210663 7390634 ~ 7399786 (+)
CI01000051_07634084_07726089 NA coding downstream 21786 7633879 ~ 7726109 (+)
CI01000051_07806350_07831779 GRIN3B coding downstream 194257 7806350 ~ 7832334 (+)
CI01000051_07855788_07865402 MED16 coding downstream 243147 7855240 ~ 7865625 (+)
CI01000051_07873312_07878328 PLPPR3B, PLPPR3 coding downstream 260984 7873077 ~ 7878627 (+)
CI01000051_07913334_07929103 PALM1A, PALM coding downstream 301241 7913334 ~ 7929182 (+)
G221409 NA non-coding upstream 154912 7455331 ~ 7455537 (+)
G221408 NA non-coding upstream 158438 7451740 ~ 7452011 (+)
G221406 NA non-coding upstream 159559 7450479 ~ 7450890 (+)
G221336 NA non-coding upstream 185030 7422923 ~ 7425419 (+)
G221386 NA non-coding upstream 197442 7401175 ~ 7413007 (+)
G221333 NA non-coding downstream 192258 7804351 ~ 7840774 (+)
G221530 NA non-coding downstream 383929 7996022 ~ 7996297 (+)
G221538 NA non-coding downstream 396822 8008915 ~ 8009351 (+)
G221539 NA non-coding downstream 404151 8016244 ~ 8016535 (+)
G221319 NA other upstream 267903 7342041 ~ 7342546 (+)
CI01000051_06825895_06830637 NA other upstream 777381 6825895 ~ 6830637 (+)
G219803 NA other upstream 2558416 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 3235119 4372658 ~ 4393677 (+)
CI01000051_08211233_08214513 NA other downstream 493550 8209722 ~ 8214696 (+)
G222727 NA other downstream 730849 8342942 ~ 8343448 (+)

Expression


Co-expression Network