CI01000051_08087374_08111384


Basic Information

Item Value
gene id CI01000051_08087374_08111384
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 8086938 ~ 8111595 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_08087374_08111384.mRNA
AAAGACCCTGATAAAAAAGAAAAACAAATGTGGATTTCTTCTATTCTTTGACTTTGTTCTTTTCTCTTTCTTCTCTTCCATACAGAAGGAAAATGAACTTCTTCCCATTACATATAATTCAGATAGTGAATGGCACTGTACCACTGAACCACTGAAGTGATTTTCAAAAAAGGTTTTTAGTGAGCCAATGAAAAAGCTGCAAACTCTAAGCATGGCCAATCAGAGAAGGATTTGTGCATCCTTGTATCTGGGCGTCTGCGCTGCTGCTCTTGGCCGTTCTGGGGTTTTGCTCACACTGGGCCACTGTCAACAGTCTTTTTCAGTGAGTGGATTTACCACAAAACCAGCTCAAAAGATCCCACATCAGCTGATGAATCTGGTTAAACAATTAACTAAGCTCAGACTGAGCTCTAAACAGAACCAAGAACCAATAGAGGCAGCAGACGTTTGTATAAAACAGCCGCAAAGCTCTCTCAGAGCGGACCTTTCTGCAGAGAAAAGTCTAATAAGCCACACTCCTCTGTCAAAAAGACAAACTGAGGACTTTGGCTTGAAGAAATCTAATCCTCTGGCAGGAGAGCAACCTGTTCAGAGGAGCAACTCAGCTTATCCACTAACCCGCAAACCCCCGGTCCATGTTATAGACCTCATGAGTGTTCTTCAAAAGGATGAGCAGGCTGGAAACGTGGGGTTTCCGCTCCAGCTCGCTAATGCGGGGAGAGAGGTGCTGTGTAACTGCAGATTGCCGATGTGGGGAGCACTGCGTTCTGTGACCGTGCCTCCACTGAGACAAACAAAGCAGGCCCTTGAGCTTACTTCTATCAAACTTGCGCACCTTTGTACGACATGTAAATACACTCTGCGGAAATACAGTGAAAGATGTTCTGACAAGTTTGCTTGTAAGAAGCACATTTACAAATTAACAAGAACAGGCCGATTCCGAAATAAGCCTAATAATTATGTGCCTCTCATATCCTCAGCGGTTTGTGTTGCTCTCTGGGTGCATGGGGACGAGTCATTAGTGTCATCTGAGGTCAACTCACATGGCAATTTCTGGCCTTACCACTGGCATGTATGTCCAGTTAGCTGGTGGGCAGGGAAAAGCATGACTGACCACTTATATCCACAATTACCGAGACAGACTGCGCTTGGACGAGTATGCCAAGGCATAAACGCCTCTGAACTTTCCAACCAAAGCACCAATAAGCAAATTCACACCATCCACAAGTCCACTCCCACCCAGGACCAAAGCCAGGGAGAGAGCAAGAGAAATTAAACCAAATTTATCAAATAGGAATCCATTTGTTCTCTTTCACAGCGGCCTTCCAGTCACAGCTGTGAGTCATTGTGCGCAACACTGCAAAAGAGAAATGGCTTTTTTTTCTTTGAGCATTTTCTTGGCTCTAACAGCAAGACTCTGTAATTGCAGTAAGTTAGGATCATTTCTCTGTAACAACACTCAGTCACTGTGTTTAGAGCAGGACATGGGCAGCTCCGGGTACATTTAAATGGCTGTAATTAATAATTCTCCAGAGAGTGGGCAAATTCACTTCTAATCACTAAGTTTCTTTGCCAGCCGCTGCCCAGCATCCCTCCAAAAATGAGCTTTACCAAAGCGCCAGCTTCAGACTCGCTCTCCATTTTGTAACTCAATTCCAACTCCAGTGACACACAGTCCAAAATGGTATTTTGAGATACCCATACTGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_08087374_08111384.mRNA True 1712 mRNA 0.44 8 8086938 8111595

Neighbor

gene id symbol gene type direction distance location
CI01000051_07836858_07853522 TMEM259 coding downstream 232827 7836825 ~ 7854111 (-)
CI01000051_07618053_07621854 NA coding downstream 465084 7618042 ~ 7621854 (-)
CI01000051_07584669_07585335 NA coding downstream 501603 7584355 ~ 7585335 (-)
CI01000051_07580256_07582183 NA coding downstream 504755 7580241 ~ 7582183 (-)
CI01000051_07410144_07439528 MAST3, MAST3B coding downstream 647410 7409463 ~ 7439528 (-)
CI01000051_08247858_08254018 NA coding upstream 136048 8247643 ~ 8254266 (-)
CI01000051_08346268_08346909 NA coding upstream 234551 8346146 ~ 8347058 (-)
CI01000051_08354973_08355986 NA coding upstream 243330 8354925 ~ 8356034 (-)
CI01000051_08401449_08401739 NA coding upstream 289618 8401213 ~ 8401786 (-)
G222526 NA non-coding downstream 78777 8007911 ~ 8008161 (-)
G222524 NA non-coding downstream 87265 7999442 ~ 7999673 (-)
G222519 NA non-coding downstream 127597 7959105 ~ 7959341 (-)
G222502 NA non-coding downstream 206098 7880640 ~ 7880840 (-)
G222289 NA non-coding downstream 219695 7819602 ~ 7867243 (-)
G222625 NA non-coding upstream 105280 8216875 ~ 8217121 (-)
G222626 NA non-coding upstream 106695 8218290 ~ 8218525 (-)
G222636 NA non-coding upstream 116617 8228212 ~ 8228511 (-)
G222637 NA non-coding upstream 118250 8229845 ~ 8230068 (-)
G222641 NA non-coding upstream 120312 8231907 ~ 8232281 (-)
G221840 NA other downstream 1953359 6132773 ~ 6133579 (-)
G221575 NA other downstream 2568114 5513952 ~ 5518824 (-)
G220041 NA other downstream 3928835 4155730 ~ 4158103 (-)
CI01000051_02955633_02960400 SCRN2 other downstream 5125444 2955380 ~ 2961148 (-)
G218861 NA other downstream 5246306 2840270 ~ 2840632 (-)
G222729 NA other upstream 230554 8342149 ~ 8342652 (-)
G222730 NA other upstream 231375 8342970 ~ 8343438 (-)

Expression


Co-expression Network