G217093


Basic Information

Item Value
gene id G217093
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 130590 ~ 131462 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU246282
AGGCATTAATGAAACCACTGCATAATAACAAGAAAACACTCAAGCACCACACACCTAAAAGATTTCAATGTTCATTCATTTCTTGGCAACTTTAAGGTTTAACTGCATAATTGGGTTTACGTTTACTGTCGTCCTTCAGTATAGCTAAGGGTGGCAAATACATTCCTCAAGAGATAAAAAATAAAATTACATACAAAAATAAAAGCTCTATGTTCAGCATGACACAAAAATCCACTATGCAACATTTTGCTTCAAGTAAACTCAGACAAATGGCATTTTTCACAATCAATAAAATACACACAACAATAAAAGGCAACACAATCCCCCAGAATTATTGAGAGCAAAAACAATATGATCAAAGATGATCTTTGAAGGCATTTTCACCAGTATGGTTGAGAAGAATGAAAAATGATCAATTACATAAAACCTCAAAACAGTCAACCAAGGTAAACTTAAGTGCATGCAACGTTGCGCCAGGCTTAAAGAAGAACTTCCTATGGCAGTGGTGCAGTAGTGTCTGTTTGGCACTGATAAATGAACCACAATCAGGCTCAGAACGCTCTTAGAGAGCTTTGGGTAACACAAACATTTTGCCTTGTTCAAAGGCATTAATCAGGAATGTCCAATACTGCTCCTTGGAGGACCACCTTCCTGCAGAGTTTAGCGTCAACCGGTTCCCACAGACCTGTCAGGAAGTTTTGAATAAGCCTGAAGACCTTGATTAGCTGCTTCAGCGTGTTTATTTAGAGTCTCCTGGCCTTCCAGGAGCAGGATTTGACAACCCCGACATTAGGACATTCAGGTAACGTTTAAGGGATAGTTCATCCACAAATGAAAACTGACCCATAATTTACTCACCCTCAAGCCATCCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246282 True 873 lncRNA 0.39 1 130590 131462

Neighbor

gene id symbol gene type direction distance location
CI01000051_00094391_00124007 SNX17 coding upstream 6430 94391 ~ 124160 (+)
CI01000051_00074000_00080983 EIF2B4 coding upstream 49528 74000 ~ 81062 (+)
CI01000051_00017447_00029701 TAB2 coding upstream 100789 17447 ~ 29801 (+)
CI01000051_00147585_00164301 NA coding downstream 16123 147585 ~ 165049 (+)
CI01000051_00194573_00205676 NA coding downstream 62365 193827 ~ 205735 (+)
CI01000051_00414617_00476423 XKR6B, XKR6 coding downstream 283155 414617 ~ 476423 (+)
CI01000051_00487642_00497395 CCM2 coding downstream 356180 487642 ~ 498310 (+)
CI01000051_00514656_00517593 ENPP5 coding downstream 382353 513815 ~ 518014 (+)
G217082 NA non-coding upstream 999 129044 ~ 129591 (+)
G217077 NA non-coding upstream 47086 73814 ~ 83504 (+)
G217097 NA non-coding upstream 95197 35164 ~ 35393 (+)
G217096 NA non-coding upstream 95733 34436 ~ 34857 (+)
G217110 NA non-coding downstream 40016 171478 ~ 171725 (+)
G217111 NA non-coding downstream 41358 172820 ~ 173271 (+)
G217112 NA non-coding downstream 42046 173508 ~ 173776 (+)
G217113 NA non-coding downstream 42991 174453 ~ 174759 (+)
G217114 NA non-coding downstream 43328 174790 ~ 175275 (+)
G217075 NA other downstream 193003 324465 ~ 384128 (+)
CI01000051_00638200_00720543 CDC42BPB other downstream 506128 637590 ~ 720669 (+)
CI01000051_02060996_02061735 NA other downstream 1928525 2060534 ~ 2062355 (+)
G218981 NA other downstream 3113981 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 4242948 4372658 ~ 4393677 (+)

Expression


Co-expression Network