G217115


Basic Information

Item Value
gene id G217115
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 175499 ~ 176079 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU246312
GTTATGTTAAAGTCACCATGAAACCAAAATTTAATTCTTATTTTTTAATGTTATAATATTACAGTACTTATCATAAATGATTTATCTGTGCATATCATTATTTTTAATTCATGTGCCCTCATGATCTTTAATCAAAATATCTTCCTCTCTCACTTGTAATGACTTCTCTGATGATGTGCTTACTGGCATGAGGGCGGGGCAACCTGTCACTCACGTGACATCACAGCAATAGCAAACAACAACCATCCTATCAATTCATGATGAAATCAAGCCCCGCCCTACATTTGTTCTTGTTCGAGAAGCCGTTTCACTCGGATATGCGTCACAATAGGGAAGAAAACATTATCACCAATTTAATTATCAAATGTTCTTGCAGATCTTCATTAGCTGGTTCAGTTGTCTTAATTTGAAGGTTCCAGCCTTCGTTGCACATCCTTGGCCCTGTTTCCACCTTTTTATTAAGATGCATTTTGGTTGATTGGACCACAAGTGGACGATGCTAAATACAGGTGTAAATAGGGTATAAAATGTTTTGAGCTTGTCCACTTCCGACCTCTTTCAGAGGTAGTTGAAAGCGCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246312 True 581 lncRNA 0.37 1 175499 176079

Neighbor

gene id symbol gene type direction distance location
CI01000051_00147585_00164301 NA coding upstream 10450 147585 ~ 165049 (+)
CI01000051_00094391_00124007 SNX17 coding upstream 51339 94391 ~ 124160 (+)
CI01000051_00074000_00080983 EIF2B4 coding upstream 94437 74000 ~ 81062 (+)
CI01000051_00017447_00029701 TAB2 coding upstream 145698 17447 ~ 29801 (+)
CI01000051_00194573_00205676 NA coding downstream 17748 193827 ~ 205735 (+)
CI01000051_00414617_00476423 XKR6B, XKR6 coding downstream 238538 414617 ~ 476423 (+)
CI01000051_00487642_00497395 CCM2 coding downstream 311563 487642 ~ 498310 (+)
CI01000051_00514656_00517593 ENPP5 coding downstream 337736 513815 ~ 518014 (+)
CI01000051_00638200_00720543 CDC42BPB coding downstream 462121 637590 ~ 720669 (+)
G217114 NA non-coding upstream 224 174790 ~ 175275 (+)
G217113 NA non-coding upstream 740 174453 ~ 174759 (+)
G217112 NA non-coding upstream 1723 173508 ~ 173776 (+)
G217111 NA non-coding upstream 2228 172820 ~ 173271 (+)
G217110 NA non-coding upstream 3774 171478 ~ 171725 (+)
G217116 NA non-coding downstream 272 176351 ~ 177020 (+)
G217117 NA non-coding downstream 1061 177140 ~ 177622 (+)
G217118 NA non-coding downstream 2171 178250 ~ 181283 (+)
G217091 NA non-coding downstream 35793 211872 ~ 213397 (+)
G217095 NA non-coding downstream 37537 213616 ~ 213862 (+)
G217075 NA other downstream 148386 324465 ~ 384128 (+)
CI01000051_02060996_02061735 NA other downstream 1883908 2060534 ~ 2062355 (+)
G218981 NA other downstream 3069364 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 4198331 4372658 ~ 4393677 (+)

Expression


Co-expression Network