G217118


Basic Information

Item Value
gene id G217118
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 178250 ~ 181283 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU246315
TACCTTGTAACCGAGACGTTCCCATTCAGTCGGTCACGTTCGACGTACGTCGGACAGACCAACGAATAGGAATCCCTACCAAAGCACCACAGGCGCTGCCCCCTTCCAGTGCTCTGTGCAAGCCTCCTGCACCCCCTCGCCTAAAGGACGGTGGGACAGGGCTAACACAGAGAGTGTCGATCACTGCTGTTCCCAAAAATCCATTCAGTGAGACTATTGGATAACACTGGGAAAGCGTACCCTTTCACTGGGAAAGGAACGCTGCGGAAGCCCACATCCTTCCCCGAAGGAGTTATGTGGAGAAGTACATAGTCTAACCCCCGTAGGGCTGTACTACATATGGAAGTACTGGGGTGACTCCAACCTGATGAGAGGTGGGTTCTCCCAGAGGGAAAGACACAGGCTTCGTTAAGGAGCAACCGTGGAATAACACATATGGGATCTCCGTAGGGTCACACATATGGAACCCAGCCTAAACCCGGTTCTCAAGTATACAACGGAGTAAAGGCCAGCGCCAGATACTCCGCCACGTCTGGCTACCGAAGGGTAATCGGGGGACTCAACAGGGTCTGCCTTATAGGGACAGAGCAAAGCCAGGGCTGGGTCTGCCTCCTCCGGGGGCAGCGCTTGCAGGCTCACTACCTGGTCCCTGAAGGGAGTGGTAGGAACCTTGGGCACATAGCCAGGCTGGGGTCTCAGTACCATGTGGCTGTCACCCGGCCCGAACTCTAGGCACGATTCGTCGACCAAAAATGCCTGCAGGTCCCCTACCCTCTTGATGGAGGCTAATGCAACCAGCAGCAAAGTCTTCATAGACAGAAGTCTCGTCGAGAAGAGCACCACTCGACGAACAGGTTATACTTCAAGGCGTAAGCACGTCTCATAGACAGTGCATGTGCCGAAATAATGGTGTTAAGTACCTCAAGGGGGTAAGTCACATAGAACCTCCGCATCCTGTCCAGGGACCAGACATGGAGTTTCCAGAGGTCTGGTCGCGGGTGCCAAAGGGTACCCCATCTCTGAGGAAGAAGGTCTTTCCTCAGAGGAATGCGCCAGGGAGGGGCTGTCGTGAGGAGCGTGAGTTCCGGGAACCAGGTCCGGTTGGGCCAATAGGGTGCAACTAGCAGGACCTGCTCCTCGTCCTCCCTGACTTTGCACAAGGTCTGTGCAAGTAGGCTCACTGGGGGAAACGCATATTTGTGAAGGCCCCGGGGCCAGCTGTGCGCCACTGCATCTGTGCCGAGTGTTCCCTCAGACAGGGAGTAAAACAGCTGGCAGTGAGAGGTTTCTGGCAAGGCAAACAGGTCTACCTGAGCCTCTCCGAACTCTCTCCAAATCAGCTGGACCACCTGGGGTGGAGTTGCCACTCTCCCGGCAGCGCAGGTCGTGAGAGCTCGTCGGCCACACGTTTGAGCACACCAGGAACATGAATGGCGTGAAGCGACCTCAGATGCTTCTAACTCCAAAGGAGGAGATGGCGGGTGAGTTGCGACATGCGAGTTGCGACATGTGAGTTGTGACATTATTTTATGGTGTATAAAATAATAAGTGCATAAATTTGCATATTTTTATCCAGTGAGTTTCCCCTCATGACATTAAACAACACACACACCTTTGCTCTAAATTCATCTAAAAAAATAACTAGTGGTTCTTTCGTGTCTTTCTTTGAAGTTGCTTTGGTTTTTTCATTAGTCTGAACCTGCTTTATCTCTGTGAGAGCGGTCAATGATGAGGTCCTCCCAAATATTGATTTTCTTTGTTCTCCTTATGTTCACCAAATCTAAACAGCATTATACATTAGATTGCACTGGTTCTGAAGGCATACAGAAGCACTGATATTAGTTATATAAAAATATTTCCCTCCGTTGAGTCATGGAATGTGTTTGAATATAAGTGATAACATTATATTCTTATTCAATTATTTTTTTGCTAATATAACTTTTTGTTTCTCTAATTTAAATGTGCATCATTTCTCTCCCACAGTCAGCTGTAACAGCGTGTAAACAGGCAGTGTCACGTAGAGAAAGAGTTGAGTAAAGCGCACACTGAACGCATGAGAATTAGCCGTCACTTCCTCCCACAGAGAGATCCGTGTCATCCATATTTGACAACCTGGACATGCATCAGGGAAATTTGACACTCGTTCCGTCTATCTTTCTGTTTCTCATTCCGTTTCTGTCCTTCTGCTCCTCTGATAGCTCTCTTTTCCTCTGCTGATTTTAGGTACCTGTGGTTTCCAAAAAAATATTCTTTTGTTAAAAAAAACAGCCTTTTATTCTATTTTAGGCGTCCCTGCTGCCGGCGTTACCCCTGTGAACCCTGTCACTGATACTCTCTCATCGTCTGTCTGTCTGTCTGCACACGCTCTCGGTGTCTTTCATCTGTGCAGTCGGGCTCAGTGGGATTCAGACGGCTCCTGACTCCTGAAACAGGAGCTGATCACATTCATGAGCTGTCTTTTATGATTTTCAACCATATTTATGCATGCATAAGAAATATTAATAACTTATTATAGCCGTTATGGGATTGGCATTGGAGCTATAAAGCAAGACGTTCTTTACGAAACTATTTTTGTTGTAATTTACACGTCACGTTGAAAGGGAGTATTTAGAAATATGCAGTTTAGTGTTCTGCTCTTTCATTTCAGTGCCATAATTTGCCCTGTCTTATAAACAAATTATTTTTAACACTCATGTTCTCTTGAGATTGACCCCAGTGATATAAAAAGATAAGTTTTCACTGTCTATTCCCCAAAAAATCCTGGGGGAAAAAAATGTATCACTATTTTAAAAAAAATATTAAGCAGCAAAAACTGTTTTCAACATTGATAATACTCAGAAATTTTTCTTGAGCAGCAAATTATCATAGCAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGATCACAGGAATAAATTACATTTTACTATACAAAAAGAAAACAATTATTGTAAATTTAATGATATTTCACAATATTACTTTTTTACTATATTTTTCATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246315 True 3034 lncRNA 0.46 1 178250 181283

Neighbor

gene id symbol gene type direction distance location
CI01000051_00147585_00164301 NA coding upstream 13201 147585 ~ 165049 (+)
CI01000051_00094391_00124007 SNX17 coding upstream 54090 94391 ~ 124160 (+)
CI01000051_00074000_00080983 EIF2B4 coding upstream 97188 74000 ~ 81062 (+)
CI01000051_00017447_00029701 TAB2 coding upstream 148449 17447 ~ 29801 (+)
CI01000051_00194573_00205676 NA coding downstream 12544 193827 ~ 205735 (+)
CI01000051_00414617_00476423 XKR6B, XKR6 coding downstream 233334 414617 ~ 476423 (+)
CI01000051_00487642_00497395 CCM2 coding downstream 306359 487642 ~ 498310 (+)
CI01000051_00514656_00517593 ENPP5 coding downstream 332532 513815 ~ 518014 (+)
CI01000051_00638200_00720543 CDC42BPB coding downstream 456917 637590 ~ 720669 (+)
G217117 NA non-coding upstream 628 177140 ~ 177622 (+)
G217116 NA non-coding upstream 1230 176351 ~ 177020 (+)
G217115 NA non-coding upstream 2171 175499 ~ 176079 (+)
G217114 NA non-coding upstream 2975 174790 ~ 175275 (+)
G217113 NA non-coding upstream 3491 174453 ~ 174759 (+)
G217091 NA non-coding downstream 30589 211872 ~ 213397 (+)
G217095 NA non-coding downstream 32333 213616 ~ 213862 (+)
G217088 NA non-coding downstream 32793 214076 ~ 215180 (+)
G217144 NA non-coding downstream 87549 268832 ~ 269200 (+)
G217146 NA non-coding downstream 97935 279218 ~ 279580 (+)
G217075 NA other downstream 143182 324465 ~ 384128 (+)
CI01000051_02060996_02061735 NA other downstream 1878704 2060534 ~ 2062355 (+)
G218981 NA other downstream 3064160 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 4193127 4372658 ~ 4393677 (+)

Expression


Co-expression Network