G217423


Basic Information

Item Value
gene id G217423
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 211892 ~ 213370 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU246665
GGATGACATGGAGGTGAGTAGATTATCAGGAAATTTTAATTCTGAAGCGAAATAAACCTTTAAAAATAAGATTGGCTGATGAGTGAAAGTGTACTGTGAACATAAACAACAATAGTGATAATAATAAATCTAACACTTATGGTTTGGAAGCCAGTGTGAGAGGCTTTGAGACAGCAATATTGTGGATCCTAAAAAAAAGAACGAATTCAAAATTTCAAAATTCCATGATCCGCAGAAAATAATTTCTGTAATGATTGCTTAAGCAAACGTCCCCTGACCCACAACCTGGCTCTGAAATTCAACAGTGCTTCAATATGTTAGTCCTGAACGGTTCTACATACGTATTTGTAAACGTTCAGCTCGAGTGAAGTTCTCGAACACATGCGGATCCTGTAAAGTTTAATCACACTTGTCTGAGAGCTTTACAGTGGCTCATGTTCGGCACAAAGCACTCGAGCGATCTGACTTCAGATGAAAGCCGTGGGAGTCGTGAAGAACGCTGCGCTGAAGGACAAACATCAGTTCTCTGTGGAATGTACATTTGGTCTCCCTTTCAAGTACATGTTTGTAGTTATTGTATATTTAAATAACATGACCAAAGTATCTACAATATAGCACCAATGCGTCGAAAAGATTTACTCTCTTTACATTATACAGGTAGCAAATCTACTTACACAAACGCTTGAGTACAATATGACAACATGCAGTTTTATACATGTTGTATTGTCAAGTTCTTACCCTGAACTTACTGTATTATAATGCAAGTACACTGGCATTCAAGAGTTATGAATCATGCACGTCTGTGATGCTTTATTGTGGGACTGTTTTGAGTGGCAGTGGAGTGAGTGAGTCCATCACTGAGGCAGGAGCTGAACGGTGTGTTGTGTTCAGGACACGTTCTGATAGGCTGGTTAGAGAGTGAGTGTGTCAGTGTGTGTGTGTTCTTGTGTACATGGTTTATGAGGACACGTGTATAATGACATGGGTATAACAACGTAAACATGTTTTATGGGGACACCTTCTGTAAACCAAATGGCTTAAAAAACATACTAAAGTGTTGTTTTGAAATTCAAAAAATGCAGAGAGTTTTCTGTGATGGTAGGTTTAGGGGTAGGGGTAGCGTAGGGGGATAGAATATACAGTTTGTACAGTATAAAAACCATTTCGTATATGGAGAGTCCCCGTAAACCATATATACAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAGTCGGAGTCCTCACTGCTGAAGGACAGGAGATCTTCCTCTGGACTCACAGCTGCATCCTCAGACACGGTTCTGCTGCGGGACGTCGCCAGTCTGATTGTGGGAACAGGAAGAGTAATCTTTAATATTTCTTATAATGTTTCCTTCTTATTTTAAACTTTTTCAAACTCTTAACCCTTGTATGCCATTCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246665 True 1479 lncRNA 0.40 1 211892 213370

Neighbor

gene id symbol gene type direction distance location
CI01000051_00131867_00138611 ZNF513 coding downstream 73102 130386 ~ 138790 (-)
CI01000051_00083434_00086769 NA coding downstream 124533 82720 ~ 87359 (-)
CI01000051_00036318_00057051 SCARA5 coding downstream 154841 36318 ~ 57051 (-)
CI01000051_00000977_00002147 NA coding downstream 209353 810 ~ 2539 (-)
CI01000051_00224709_00227613 NA coding upstream 11137 224507 ~ 227613 (-)
CI01000051_00262483_00263385 BLK coding upstream 49071 262441 ~ 263385 (-)
CI01000051_00278614_00302552 NA coding upstream 64822 278192 ~ 304373 (-)
CI01000051_00334616_00337009 SOX7 coding upstream 120683 334053 ~ 337197 (-)
CI01000051_00346827_00352024 NA coding upstream 133457 346827 ~ 352381 (-)
G217489 NA non-coding downstream 4598 206849 ~ 207294 (-)
G217488 NA non-coding downstream 7829 203436 ~ 204063 (-)
G217487 NA non-coding downstream 8497 203180 ~ 203395 (-)
G217486 NA non-coding downstream 8910 202778 ~ 202982 (-)
G217485 NA non-coding downstream 11264 200404 ~ 200628 (-)
G217424 NA non-coding upstream 244 213614 ~ 213852 (-)
G217419 NA non-coding upstream 710 214080 ~ 215124 (-)
G217420 NA non-coding upstream 2114 215484 ~ 216767 (-)
G217417 NA non-coding upstream 3499 216869 ~ 218155 (-)
G217553 NA non-coding upstream 84680 298050 ~ 298268 (-)
CI01000051_00394082_00407612 MTMR9 other upstream 181861 392720 ~ 407612 (-)
CI01000051_00560810_00563417 NA other upstream 348826 560768 ~ 563417 (-)
CI01000051_01785489_01787612 IGFBP1A other upstream 1495928 1784416 ~ 1787760 (-)

Expression


Co-expression Network