XLOC_009697


Basic Information

Item Value
gene id XLOC_009697
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 8966209 ~ 8966926 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021888
CAGGGTTTTGAGACTAAGTAAAATTATGTCAGCTTCCCTCACATATATTTTCAACTAGGCAGTAGAATATATGATTTCATGTGACTGCTGacattgtatttttcttttgaatGTTTTAGGAAAAAAACCAGGAAGCTACATTCATAAATGGATGATCAGTTTTGAGGGGCAAATAATCTGAGAGAGCATCCAGCCAAGTTTTCTCTCTGGTATAGCTGCTGGGTTTTTAACTTGGAGAACCAAGCTGAGGCTGCATGCACATTGGAATTAATTCAGAGGTTAGACGcttaaattcatatatttatttctcttcacattattattatataaacttttaCCCACACTAATTCTGAATGTATGCATTTTTTCAGGAGCTTTACGGGAAACCGTGAAAAAGGCTCCAAGAGTGGACACATCCTATCGAAGGGAATGAGGAAGGTCACCCACAAAAAGAATTTAGTCAACACTAAGGTTGCCAGTTTACTTAAAGAGGCTAATGGACTTTGAATGTGATGTCATTTAAgtgacaccacacacacacacacacaccttacacATCCTCTTCACTAATGGCACTCATTTTATTGTGTTAGTCGAGTAATTTTTTCAGGTGTTTGTTCTTGAATACCTAAACTGTTCATtgcattcttttttatttcttaatgacTAATTCTGTAATTCACTCAGAAGTTTTCAGAGTAGTAATTGTTGTAGTAAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021888 True 718 lncRNA 0.36 1 8966209 8966926

Neighbor

gene id symbol gene type direction distance location
XLOC_009696 NA coding upstream 370 8964889 ~ 8965839 (+)
XLOC_009695 cabz01093075.1 coding upstream 240406 8716800 ~ 8725803 (+)
XLOC_009694 si:cabz01093077.1 coding upstream 265109 8695595 ~ 8701100 (+)
XLOC_009693 ccr2 coding upstream 285031 8673636 ~ 8681178 (+)
XLOC_009692 ccr2 coding upstream 295796 8668519 ~ 8670413 (+)
XLOC_009698 dnah5 coding downstream 86349 9053275 ~ 9267496 (+)
XLOC_009699 CR394537.2 coding downstream 270206 9237132 ~ 9237246 (+)
XLOC_009700 ice1 coding downstream 433735 9400661 ~ 9420358 (+)
XLOC_009701 pimr208 coding downstream 528657 9495583 ~ 9502154 (+)
XLOC_009702 NA coding downstream 537447 9504373 ~ 9505519 (+)
XLOC_009691 NA non-coding upstream 593639 8355479 ~ 8372570 (+)
XLOC_009688 NA non-coding upstream 1172441 7792721 ~ 7793768 (+)
XLOC_009682 CT574585.2 non-coding upstream 1400114 7564527 ~ 7566095 (+)
XLOC_009681 NA non-coding upstream 1450702 7514850 ~ 7515507 (+)
XLOC_009703 NA non-coding downstream 548400 9515326 ~ 9515807 (+)
XLOC_009704 NA non-coding downstream 559154 9526080 ~ 9528306 (+)
XLOC_009712 NA non-coding downstream 1045409 10012335 ~ 10016713 (+)

Expression


Co-expression Network