Gene
RNA
| Item | Value |
|---|---|
| gene id | G217579 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 446317 ~ 446683 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: rho GTPase-activating protein 12 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU246824 | True | 367 | lncRNA | 0.48 | 1 | 446317 | 446683 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_00394082_00407612 | MTMR9 | coding | downstream | 38705 | 392720 ~ 407612 (-) |
| CI01000051_00383638_00388102 | TDH, TDH.S | coding | downstream | 58215 | 383322 ~ 388102 (-) |
| CI01000051_00357855_00378052 | NA | coding | downstream | 68265 | 356834 ~ 378052 (-) |
| CI01000051_00346827_00352024 | NA | coding | downstream | 93936 | 346827 ~ 352381 (-) |
| CI01000051_00334616_00337009 | SOX7 | coding | downstream | 109120 | 334053 ~ 337197 (-) |
| CI01000051_00478608_00478959 | NA | coding | upstream | 31547 | 475707 ~ 482200 (-) |
| CI01000051_00505008_00505358 | FAM167AB | coding | upstream | 58325 | 505008 ~ 505468 (-) |
| CI01000051_00520062_00525658 | IF5, EIF5 | coding | upstream | 73127 | 519810 ~ 525658 (-) |
| CI01000051_00560810_00563417 | NA | coding | upstream | 114085 | 560768 ~ 563417 (-) |
| CI01000051_00568303_00576339 | NA | coding | upstream | 121184 | 567867 ~ 576339 (-) |
| G217578 | NA | non-coding | downstream | 965 | 445108 ~ 445352 (-) |
| G217577 | NA | non-coding | downstream | 2407 | 443695 ~ 443910 (-) |
| G217576 | NA | non-coding | downstream | 7774 | 438301 ~ 438543 (-) |
| G217575 | NA | non-coding | downstream | 13186 | 432931 ~ 433131 (-) |
| G217574 | NA | non-coding | downstream | 16772 | 429304 ~ 429545 (-) |
| G217580 | NA | non-coding | upstream | 93 | 446776 ~ 447054 (-) |
| G217581 | NA | non-coding | upstream | 3057 | 449740 ~ 450044 (-) |
| G217582 | NA | non-coding | upstream | 4025 | 450708 ~ 451057 (-) |
| G217583 | NA | non-coding | upstream | 8999 | 455682 ~ 455887 (-) |
| G217584 | NA | non-coding | upstream | 15722 | 462405 ~ 462618 (-) |
| CI01000051_00278614_00302552 | NA | other | downstream | 163688 | 278192 ~ 304373 (-) |
| CI01000051_00224709_00227613 | NA | other | downstream | 203291 | 224507 ~ 227613 (-) |
| CI01000051_01785489_01787612 | IGFBP1A | other | upstream | 1262615 | 1784416 ~ 1787760 (-) |
| G218728 | NA | other | upstream | 2080660 | 2527343 ~ 2546459 (-) |
| G218861 | NA | other | upstream | 2393587 | 2840270 ~ 2840632 (-) |
| CI01000051_02955633_02960400 | SCRN2 | other | upstream | 2512905 | 2955380 ~ 2961148 (-) |
