XLOC_009701 (pimr208)


Basic Information

Item Value
gene id XLOC_009701
gene name pimr208
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 9495583 ~ 9502154 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019440
TGGACGTACAGTCGACAACTATACACATAGTTTGAGAGCAGATAGTGTGTATGTTAGATAAAGGTGGTTTCAAAGCACctttatatattacaaataacAGCATGTGTAAACGCTTTTCGTTACAAACCAGCAGCCCGATGTCCGCAGAAGCTCAGCCGAGGGTGAGTGACTCTGCACGGGCAGCTGCAGGAAAGACCACCCGCTCAACAGGAGCATCAGAACTGGAGGCTTCTCCTACAGCAGCAGCTATGGAGAACAGCCCAACTGATAAACAAGCAAAAAGGTGGAAGAAAGGGATCCGTGCATTCTTTCGGCGAATAGGGAAGGGGCTCAAGCGTTGCACCCTCTGTTGGCCTGGAGAGAACATGTTGATCCCATTTCCATGCAGCGATCCCAATGAACCCCAGCCAGAATTATCTGGCCTCCAATGGGCATTATCAATCGATCCGTGC
>TCONS_00019441
ACAGTCGACAACTATACACATAGTTTGAGAGCAGATAGTGTGTATGTTAGATAAAGGTGGTTTCAAAGCACctttatatattacaaataacAGCATGTGTAAACGCTTTTCGTTACAAACCAGCAGCCCGATGTCCGCAGAAGCTCAGCCGAGGGTGAGTGACTCTGCACGGGCAGCTGCAGGAAAGACCACCCGCTCAACAGGAGCATCAGAACTGGAGGCTTCTCCTACAGCAGCAGCTATGGAGAACAGCCCAACTGAGACGGGAAAGTCCATCTGTGCATTCTTCAACCGGACATGGAAGTCTTTTAAGGATCGTGTCCTCCTCTGGCGACGGGGCAATAAAGTGGGCCGAGATCCAGTTGGCGTCCCAGTGTCTCCACAGAATTTGGAAGATCTCCTGCCAGCTGTCGATCCAGGCCCATCCGATCTTGTTTTGGAGGCAGTATCTGAATTAGGATCATCCAGTCACGATGATCTGGAGCCATCATCTGCGTCGGGTCCATCCAGTAAGCTGACGCCTGGTCCAATTTATTCTTGGCCGGGTAAAGGATCATTTTACTCCTTTTATGATGTGGGAAAGATTCTGGGAAGTGGAGCCTATGGCACTGTGAAGTTGGTGACACGCAGATTTGATGGCCAGAAGGTTGCTGTCAAATTTCTTAAAAAGAACACATGGGACAAGTTTATCTATGTGCCTGGATGTGCCAAACCTTTGGTTGCGGAAGTGGCATTAAATCTGCTGCTTCGCAAATCCCAAAGCCCCCACATCGTACAAATGATCGATTGGTTTGAGGAGCCAGAGAAGTACATCCTCATTATGGAATATCCAGATCCATGTGAGACCTTGGAAACGTTCATCAATGGCAAAGGAGGATCACTAGGAGAAACTGTGGCTCGTGGCTTATTTCGCCAAGTGGTGCTCGCAGCCAAACACTGCGCTGACCAGGGCATCTTCCACAAAGACATCAAATCAGACAACATCCTGATCAACACGGACACGCTGCAGCTCAAATTGATTGACTTTGGCTGTAGTGAGCTTATTATGAACCCTACCTCTATAAATCATGAATGGGCCATGAAAGAAGCCATTTGCAGCTTGCGAAATCTGCTTATAGAAATGGTGAGCGGAGGCCAGCATTTTATGTCATTTCTGACCAGAAAAGATGATCAGTTGATTCCAGGATATTCCAAAGAGTTTCAAGATCTGATAACTCAGTGCCATAAAAAAGATGACGGCAGGAGAGCAACATTAGAGCAGATCTTGCAGCACGAATGGCTTCAGCAAGTCTG

Function

symbol description
pimr208 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000078162

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019440 False 452 mRNA 0.49 2 9495583 9497139
TCONS_00019441 True 1293 mRNA 0.47 8 9495590 9502154

Neighbor

gene id symbol gene type direction distance location
XLOC_009700 ice1 coding upstream 75225 9400661 ~ 9420358 (+)
XLOC_009698 dnah5 coding upstream 228087 9053275 ~ 9267496 (+)
XLOC_009699 CR394537.2 coding upstream 258337 9237132 ~ 9237246 (+)
XLOC_009697 NA coding upstream 528657 8966209 ~ 8966926 (+)
XLOC_009696 NA coding upstream 529744 8964889 ~ 8965839 (+)
XLOC_009702 NA coding downstream 2219 9504373 ~ 9505519 (+)
XLOC_009703 NA coding downstream 13172 9515326 ~ 9515807 (+)
XLOC_009704 NA coding downstream 23926 9526080 ~ 9528306 (+)
XLOC_009705 ca14 coding downstream 37879 9540033 ~ 9558103 (+)
XLOC_009706 taf2 coding downstream 78545 9580699 ~ 9606284 (+)
XLOC_009691 NA non-coding upstream 1123013 8355479 ~ 8372570 (+)
XLOC_009688 NA non-coding upstream 1701815 7792721 ~ 7793768 (+)
XLOC_009712 NA non-coding downstream 510181 10012335 ~ 10016713 (+)
XLOC_009715 FP016064.1 non-coding downstream 822395 10324549 ~ 10324665 (+)

Expression


Co-expression Network