Gene
RNA
| Item | Value |
|---|---|
| gene id | G217779 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 1138482 ~ 1138785 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU247050 | True | 304 | lncRNA | 0.35 | 1 | 1138482 | 1138785 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_01015039_01066156 | CDH2 | coding | downstream | 72165 | 1014806 ~ 1066317 (-) |
| CI01000051_00846746_00856041 | AQP4 | coding | downstream | 282441 | 846502 ~ 856041 (-) |
| CI01000051_00824615_00825825 | KCTD1 | coding | downstream | 312406 | 824615 ~ 826076 (-) |
| CI01000051_00809947_00817933 | KCTD1 | coding | downstream | 320549 | 809947 ~ 817933 (-) |
| CI01000051_00787723_00808318 | NA | coding | downstream | 329458 | 787723 ~ 809024 (-) |
| CI01000051_01371462_01386606 | NA | coding | upstream | 232677 | 1371462 ~ 1386606 (-) |
| CI01000051_01468663_01486168 | B4GALT5, B4GALT6 | coding | upstream | 329634 | 1468419 ~ 1487172 (-) |
| CI01000051_01511542_01512516 | NA | coding | upstream | 372358 | 1511143 ~ 1512554 (-) |
| CI01000051_01528013_01535266 | OPN7A | coding | upstream | 389124 | 1527909 ~ 1535266 (-) |
| CI01000051_01560871_01627451 | TRAPPC8 | coding | upstream | 422043 | 1560828 ~ 1627665 (-) |
| G217731 | NA | non-coding | downstream | 163952 | 943514 ~ 974530 (-) |
| G217698 | NA | non-coding | downstream | 247159 | 890946 ~ 891323 (-) |
| G217688 | NA | non-coding | downstream | 267201 | 870337 ~ 871281 (-) |
| G217660 | NA | non-coding | downstream | 372544 | 765579 ~ 765938 (-) |
| G217783 | NA | non-coding | upstream | 11456 | 1150241 ~ 1150465 (-) |
| G217785 | NA | non-coding | upstream | 12504 | 1151289 ~ 1151708 (-) |
| G217789 | NA | non-coding | upstream | 16576 | 1155361 ~ 1155578 (-) |
| G217791 | NA | non-coding | upstream | 17032 | 1155817 ~ 1156050 (-) |
| G217813 | NA | non-coding | upstream | 39241 | 1178026 ~ 1178271 (-) |
| CI01000051_00560810_00563417 | NA | other | downstream | 571327 | 560768 ~ 563417 (-) |
| CI01000051_00394082_00407612 | MTMR9 | other | downstream | 732687 | 392720 ~ 407612 (-) |
| CI01000051_00278614_00302552 | NA | other | downstream | 855853 | 278192 ~ 304373 (-) |
| CI01000051_00224709_00227613 | NA | other | downstream | 895456 | 224507 ~ 227613 (-) |
| CI01000051_01785489_01787612 | IGFBP1A | other | upstream | 570513 | 1784416 ~ 1787760 (-) |
| G218728 | NA | other | upstream | 1388558 | 2527343 ~ 2546459 (-) |
| G218861 | NA | other | upstream | 1701485 | 2840270 ~ 2840632 (-) |
| CI01000051_02955633_02960400 | SCRN2 | other | upstream | 1820803 | 2955380 ~ 2961148 (-) |
| G220041 | NA | other | upstream | 3016945 | 4155730 ~ 4158103 (-) |
