XLOC_009703



Basic Information


Item Value
gene id XLOC_009703
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 9515326 ~ 9515807 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021683
gcaaaaaaatttatatttcattttttcatagcaaattaacatgcaactcaGTTGTTattaggttaaataacaaaatgggatttaatcaacaagcaagttaaatatagatgataaatagatgaaaatgaaagagctaaggactgaaaccagcttaaatgttcttgaatataacgtgttacagtgatgtacacatgtacaaatatgtccaaaaaagcctttttttagaggtgttttgacagttcagagccaccgtacaagtgaaaagctagatacagaatgtattattttaaaaaatgtgacatAAATTCATCCTATTtagcgttttagattcttttgaacacgtAGTGTagtgcttgtcaatcagacaatgcttctgtgttcgttcttgctgtcaatcgcggagaaaatgatcgatgaaaagtttatgataaaccgctgcgAGGGCGCCGATTAGCCCTCGGAGTCAGATTTTGACACAAACC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021683 True 482 lncRNA 0.34 1 9515326 9515807

Neighbor


gene id symbol gene type direction distance location
XLOC_009702 NA coding upstream 9807 9504373 ~ 9505519 (+)
XLOC_009701 pimr208 coding upstream 13172 9495583 ~ 9502154 (+)
XLOC_009700 ice1 coding upstream 94968 9400661 ~ 9420358 (+)
XLOC_009698 dnah5 coding upstream 247830 9053275 ~ 9267496 (+)
XLOC_009699 CR394537.2 coding upstream 278080 9237132 ~ 9237246 (+)
XLOC_009704 NA coding downstream 10273 9526080 ~ 9528306 (+)
XLOC_009705 ca14 coding downstream 24226 9540033 ~ 9558103 (+)
XLOC_009706 taf2 coding downstream 64892 9580699 ~ 9606284 (+)
XLOC_009707 enpp2 coding downstream 93914 9609721 ~ 9662205 (+)
XLOC_009708 ecm1b coding downstream 198043 9713850 ~ 9725432 (+)
XLOC_009697 NA non-coding upstream 548400 8966209 ~ 8966926 (+)
XLOC_009696 NA non-coding upstream 549487 8964889 ~ 8965839 (+)
XLOC_009691 NA non-coding upstream 1142756 8355479 ~ 8372570 (+)
XLOC_009712 NA non-coding downstream 496528 10012335 ~ 10016713 (+)
XLOC_009715 FP016064.1 non-coding downstream 808742 10324549 ~ 10324665 (+)
XLOC_009718 NA non-coding downstream 862524 10378331 ~ 10379821 (+)
XLOC_009719 CU929328.1 non-coding downstream 871912 10387719 ~ 10389787 (+)

Expression



Co-expression Network