Gene
RNA
| Item | Value |
|---|---|
| gene id | G218521 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 1439176 ~ 1443058 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU247855 | True | 207 | lncRNA | 0.48 | 2 | 1439176 | 1443058 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_01371462_01386606 | NA | coding | downstream | 52570 | 1371462 ~ 1386606 (-) |
| CI01000051_01015039_01066156 | CDH2 | coding | downstream | 372859 | 1014806 ~ 1066317 (-) |
| CI01000051_00846746_00856041 | AQP4 | coding | downstream | 583135 | 846502 ~ 856041 (-) |
| CI01000051_00824615_00825825 | KCTD1 | coding | downstream | 613100 | 824615 ~ 826076 (-) |
| CI01000051_00809947_00817933 | KCTD1 | coding | downstream | 621243 | 809947 ~ 817933 (-) |
| CI01000051_01468663_01486168 | B4GALT5, B4GALT6 | coding | upstream | 25361 | 1468419 ~ 1487172 (-) |
| CI01000051_01511542_01512516 | NA | coding | upstream | 68085 | 1511143 ~ 1512554 (-) |
| CI01000051_01528013_01535266 | OPN7A | coding | upstream | 84851 | 1527909 ~ 1535266 (-) |
| CI01000051_01560871_01627451 | TRAPPC8 | coding | upstream | 117770 | 1560828 ~ 1627665 (-) |
| CI01000051_01644907_01652696 | MCM3L, MCM3 | coding | upstream | 201742 | 1644800 ~ 1652719 (-) |
| G218497 | NA | non-coding | downstream | 50663 | 1388257 ~ 1388513 (-) |
| G217813 | NA | non-coding | downstream | 260905 | 1178026 ~ 1178271 (-) |
| G217791 | NA | non-coding | downstream | 283126 | 1155817 ~ 1156050 (-) |
| G217789 | NA | non-coding | downstream | 283598 | 1155361 ~ 1155578 (-) |
| G217785 | NA | non-coding | downstream | 287468 | 1151289 ~ 1151708 (-) |
| G218532 | NA | non-coding | upstream | 47605 | 1490663 ~ 1490879 (-) |
| G218558 | NA | non-coding | upstream | 102572 | 1545630 ~ 1545866 (-) |
| G218568 | NA | non-coding | upstream | 222646 | 1665704 ~ 1665926 (-) |
| G218569 | NA | non-coding | upstream | 223429 | 1666487 ~ 1666830 (-) |
| G218571 | NA | non-coding | upstream | 226209 | 1669267 ~ 1669721 (-) |
| CI01000051_00560810_00563417 | NA | other | downstream | 872021 | 560768 ~ 563417 (-) |
| CI01000051_00394082_00407612 | MTMR9 | other | downstream | 1033381 | 392720 ~ 407612 (-) |
| CI01000051_00278614_00302552 | NA | other | downstream | 1156547 | 278192 ~ 304373 (-) |
| CI01000051_00224709_00227613 | NA | other | downstream | 1196150 | 224507 ~ 227613 (-) |
| CI01000051_01785489_01787612 | IGFBP1A | other | upstream | 266240 | 1784416 ~ 1787760 (-) |
| G218728 | NA | other | upstream | 1084285 | 2527343 ~ 2546459 (-) |
| G218861 | NA | other | upstream | 1397212 | 2840270 ~ 2840632 (-) |
| CI01000051_02955633_02960400 | SCRN2 | other | upstream | 1516530 | 2955380 ~ 2961148 (-) |
| G220041 | NA | other | upstream | 2712672 | 4155730 ~ 4158103 (-) |
