Gene
RNA
| Item | Value |
|---|---|
| gene id | G218650 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 2069025 ~ 2069249 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU247987 | True | 225 | lncRNA | 0.43 | 1 | 2069025 | 2069249 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_01989511_02060303 | USP24 | coding | downstream | 8722 | 1989471 ~ 2060303 (-) |
| CI01000051_01926867_01942055 | DHCR24 | coding | downstream | 126970 | 1926686 ~ 1942055 (-) |
| CI01000051_01915943_01920786 | NA | coding | downstream | 148239 | 1915374 ~ 1920786 (-) |
| CI01000051_01894807_01902190 | SIRT5 | coding | downstream | 166835 | 1894319 ~ 1902190 (-) |
| CI01000051_01852579_01861297 | NA | coding | downstream | 207142 | 1852424 ~ 1861883 (-) |
| CI01000051_02148607_02152701 | NA | coding | upstream | 79220 | 2148469 ~ 2153425 (-) |
| CI01000051_02297468_02301682 | PLPP3 | coding | upstream | 227652 | 2296901 ~ 2311967 (-) |
| CI01000051_02359343_02360115 | NA | coding | upstream | 289842 | 2359091 ~ 2360115 (-) |
| CI01000051_02362692_02367269 | NA | coding | upstream | 292518 | 2361767 ~ 2367269 (-) |
| CI01000051_02391113_02451758 | NA | coding | upstream | 320633 | 2389882 ~ 2451758 (-) |
| G218645 | NA | non-coding | downstream | 91969 | 1976821 ~ 1977056 (-) |
| G218466 | NA | non-coding | downstream | 92533 | 1976127 ~ 1976492 (-) |
| G218643 | NA | non-coding | downstream | 94066 | 1974665 ~ 1974959 (-) |
| G218461 | NA | non-coding | downstream | 100194 | 1964836 ~ 1968831 (-) |
| G218460 | NA | non-coding | downstream | 104659 | 1961057 ~ 1964366 (-) |
| G218770 | NA | non-coding | upstream | 137693 | 2206942 ~ 2207172 (-) |
| G218734 | NA | non-coding | upstream | 242848 | 2312097 ~ 2316726 (-) |
| G218716 | NA | non-coding | upstream | 281232 | 2350481 ~ 2354144 (-) |
| G218748 | NA | non-coding | upstream | 323162 | 2392411 ~ 2395777 (-) |
| CI01000051_01785489_01787612 | IGFBP1A | other | downstream | 281265 | 1784416 ~ 1787760 (-) |
| CI01000051_00560810_00563417 | NA | other | downstream | 1501870 | 560768 ~ 563417 (-) |
| CI01000051_00394082_00407612 | MTMR9 | other | downstream | 1663230 | 392720 ~ 407612 (-) |
| CI01000051_00278614_00302552 | NA | other | downstream | 1786396 | 278192 ~ 304373 (-) |
| CI01000051_00224709_00227613 | NA | other | downstream | 1825999 | 224507 ~ 227613 (-) |
| G218728 | NA | other | upstream | 458094 | 2527343 ~ 2546459 (-) |
| G218861 | NA | other | upstream | 771021 | 2840270 ~ 2840632 (-) |
| CI01000051_02955633_02960400 | SCRN2 | other | upstream | 890339 | 2955380 ~ 2961148 (-) |
| G220041 | NA | other | upstream | 2086481 | 4155730 ~ 4158103 (-) |
| G221575 | NA | other | upstream | 3444703 | 5513952 ~ 5518824 (-) |
