XLOC_009713 (mrs2)


Basic Information

Item Value
gene id XLOC_009713
gene name mrs2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 10264286 ~ 10292937 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019453
CATAGTCATATGTTGTCCTTTTGAAATGGGGAAGCCTACGATAGAAAACATGGGAACTGCCTTTAAATTTTAGTATACATGTATAACCACATGCGATTTAACAGTAGCTTACAGCTGAAGTCATCCAATATAgacttaattttcttttatttttcgattttatgttgttttaactgTTGACAGATAAAGCAACATCGCAAAACCATCAAGCTGTGTGGGACTTTTAGTAAGACCAAAATAAATGACATCGTGACATTTTGTGTTGATGGCGTCTGCTACagtaaaattagacttttaacTCAAACATTTAAAAGTATGGAGCCATGTTTAAAGTTCGCGTTTCGAGAGAGTCTGTGGAAAGTTTCAGCGAAGTGCTGGACGTGGAGGTCTGTCAAGTGCGCAAGATCACCTTTCAAACGCTCTGTTACATCAACATGTGGACGAACACATCGCAACACAATATTGAATGCTGAGGGACAATACCTCTCCTTTTGCCAAAGAAGCACAGATTCATCGCAGGCAGCTCTTTCTAGTGTTGCTCCAGTGTTTCTTGTGATGAGGTTTGAGCCAGATGGGAGCCTGACCACATTTGCAAAAAAGAAGACTGAACTGTATCAGGAGATCGGTTTGCAGGCAAGAGATCTGAGATTCCAACACTCAACAAGTGTTACATCACGGAACAATGTTATCATCATTCGGATGGAGTCCCTGAAGGCAGTGGTTACCTCAAGCTGTTTGTTGGTtctggatttccgaggtcttggTCTGGAGAAATGGCTGGTGTTAGAACTTGGGCCACAATTGGCAGGAGATGGAAATTTGGCTACTTACTCTCTACCTTTTGAGTTCAGAGCTCTGGAAGCCATTCTGCAGCACAGGGTGAATGTACTGTATACACGGCTGAATGAAGTTCAACCTCAGGTTTTGGATTGCCTGGACTCGCTGGTCGACCCAAAGCTCCTCTCTGCTGACCGCAGCAAACTCCATATGCTCCTACTTAACAGCAAAAGCCTCTCAGAGCTGGAGACAGACATTAAAGTGTTCAAAGACAGTCTGCTAAAGATCCTGGATGAAGATGAACTGATAGATGAACTCTGCCTCACTAAGTGGAGTGACCCGCAAGTGTTTGAGGAGAGCAGTTTGGGCATAGATCACGCTGAAGAGATGGAGTTATTGCTGGAAAATTACTTCATGCAGGCAGAAGAGCTGGGCAACAAGGCCAGAGAGTTGAAAGACCTCATTGATGACTCTGAAAGCGTTATTTTCATTAACCTGGATAGTCACCGAAATGTCATGATGCGCCTGAACCTCCAGCTCACCATGGGAACCTTCTCTGTCTCCTTGTTTGGGCTTATGGGTGTGGCGTTTGGGATGAATTTGGAATCTACTTTTGAAGAGgaccCACGTGTGTTTTGGCTGGTGACAGGATTCATGTTTCTAGGAAGTGGACTTATCTGGAGAAAGCTTCTCTCTTTTCTAGGCCGACATTTAGAACCCAGCTCTCCAACTCCTATCCCCCCTGTTTGGAGGAAAAATCAAATTGGCCCTTTAAAAACTACCGATATTAAACCTGGAACAAGATAAtgaaatattgtatatatttatatttttttcaatatccacccccacccccaccccttcCATTCCTGTATTTCTGAATGTTATGCATGCTGTATTGTTTTCTTCACTATTATATGCTGCTCATATCAGTCTATTTGAACATTTCGTTTATCTACTTACAtttattgacagtggaaacggccataaaagtgtaccaaaccgaaccgtaccactcagtggaaacgggccatcaTAGATACTGTGTGGTACCATGTAGACCATTTTTATCTTACTTTCTGTTGTTTATCTTTTGAATTTTCTTGTCACCATCATTGAAGTACATTAGATGTATTTAATTGACAGATGCGCCGTCTTTTCAGAAAAGGAAATGATCTGCCATGAATAGGTTTAATAAAACtacaatattttttataag
>TCONS_00019454
ATGGAGCCATGTTTAAAGTTCGCGTTTCGAGAGAGTCTGTGGAAAGTTTCAGCGAAGTGCTGGACGTGGAGGTCTGTCAAGTGCGCAAGATCACCTTTCAAACGCTCTGGACAATGTAGGTGCCACACCTACCTCTCCTTTTGCCAAAGAAGCACAGATTCATCGCAGGCAGCTCTTTCTAGTGTTGCTCCAGTGTTTCTTGTGATGAGGTTTGAGCCAGATGGGAGCCTGACCACATTTGCAAAAAAGAAGACTGAACTGTATCAGGAGATCGGTTTGCAGGCAAGAGATCTGAGATTCCAACACTCAACAAGTGTTACATCACGGAACAATGTTATCATCATTCGGATGGAGTCCCTGAAGGCAGTGGTTACCTCAAGCTGTTTGTTGGTtctggatttccgaggtcttggTCTGGAGAAATGGCTGGTGTTAGAACTTGGGCCACAATTGGCAGGAGATGGAAATTTGGCTACTTACTCTCTACCTTTTGAGTTCAGAGCTCTGGAAGCCATTCTGCAGCACAGGGTGAATGTACTGTATACACGGCTGAATGAAGTTCAACCTCAGGTTTTGGATTGCCTGGACTCGCTGGTCGACCCAAAGCTCCTCTCTGCTGACCGCAGCAAACTCCATATGCTCCTACTTAACAGCAAAAGCCTCTCAGAGCTGGAGACAGACATTAAAGTGTTCAAAGACAGTCTGCTAAAGATCCTGGATGAAGATGAACTGATAGATGAACTCTGCCTCACTAAGTGGAGTGACCCGCAAGTGTTTGAGGAGAGCAGTTTGGGCATAGATCACGCTGAAGAGATGGAGTTATTGCTGGAAAATTACTTCATGCAGGCAGAAGAGCTGGGCAACAAGGCCAGAGAGTTGAAAGACCTCATTGATGACTCTGAAAGCGTTATTTTCATTAACCTGGATAGTCACCGAAATGTCATGATGCGCCTGAACCTCCAGCTCACCATGGGAACCTTCTCTGTCTCCTTGTTTGGGCTTATGGGTGTGGCGTTTGGGATGAATTTGGAATCTACTTTTGAAGAGgaccCACGTGTGTTTTGGCTGGTGACAGGATTCATGTTTCTAGGAAGTGGACTTATCTGGAGAAAGCTTCTCTCTTTTCTAGGCCGACATTTAGAACCCAGCTCTCCAACTCCTATCCCCCCTGTTTGGAGGAAAAATCAAATTGGCCCTTTAAAAACTACCGATATTAAACCTGGAACAAGATAA
>TCONS_00019455
TTTTCTAGGCCGACATTTAGAACCCAGCTCTCCAACTCCTATCCCCCCTGTTTGGAGGAAAAATCAAATTGGCCCTTTAAAAACTACCGATATTAAACCTGGAACAAGATAAtgaaatattCGCCTGGCAGGCGAGTCATGATATCCAGAACTTCTCCTGTCAGCTTGGCAGCACCCACTTCTGACCCACCACTCGACACCATGGTGACCTTCTGGGCGGCACAGAGCGGCTTGCTGATCTCCTCTGCCATCTGCAGGAGTGGAGGACAAATATTAAGGAGTGATCTTATTACAGATAGCAGTAAACCTAGCATTCTGTCAGAGTCAATAAAAAAGTCACTCATTTT

Function

symbol description
mrs2 Predicted to act upstream of or within ion transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to human MRS2 (magnesium transporter MRS2).

GO:

id name namespace
GO:0006811 ion transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005739 mitochondrion cellular_component

KEGG:

id description
ko02000 Transporters

ZFIN:

id description
ZDB-GENE-141211-29 Predicted to act upstream of or within ion transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to human MRS2 (magnesium transporter MRS2).

Ensembl:

ensembl_id ENSDARG00000062872

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019453 False 1996 mRNA 0.42 11 10264286 10284874
TCONS_00019454 False 1233 mRNA 0.47 12 10264601 10284462
TCONS_00019455 True 347 processed_transcript 0.46 3 10284258 10292937

Neighbor

gene id symbol gene type direction distance location
XLOC_009712 NA coding upstream 247573 10012335 ~ 10016713 (+)
XLOC_009711 zgc:92912 coding upstream 478027 9779680 ~ 9786259 (+)
XLOC_009710 psmd4b coding upstream 486358 9762261 ~ 9777928 (+)
XLOC_009709 pip5k1ab coding upstream 502313 9726038 ~ 9761973 (+)
XLOC_009708 ecm1b coding upstream 538854 9713850 ~ 9725432 (+)
XLOC_009714 tubb5 coding downstream 25956 10318893 ~ 10327620 (+)
XLOC_009715 FP016064.1 coding downstream 31612 10324549 ~ 10324665 (+)
XLOC_009716 mdc1 coding downstream 36764 10329701 ~ 10345769 (+)
XLOC_009717 si:dkeyp-77h1.4 coding downstream 53340 10346277 ~ 10369298 (+)
XLOC_009718 NA coding downstream 85394 10378331 ~ 10379821 (+)
XLOC_009704 NA non-coding upstream 735980 9526080 ~ 9528306 (+)
XLOC_009703 NA non-coding upstream 748479 9515326 ~ 9515807 (+)
XLOC_009702 NA non-coding upstream 758767 9504373 ~ 9505519 (+)
XLOC_009699 CR394537.2 non-coding upstream 1027040 9237132 ~ 9237246 (+)
XLOC_009719 CU929328.1 non-coding downstream 94782 10387719 ~ 10389787 (+)
XLOC_009724 NA non-coding downstream 324417 10617354 ~ 10617686 (+)
XLOC_009733 NA non-coding downstream 1068823 11361760 ~ 11376845 (+)

Expression


Co-expression Network