G219328


Basic Information

Item Value
gene id G219328
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 3849485 ~ 3849696 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU248778
CATTTCTCATTTTTATTTTCTTAAGTTTAAGTTTTTAATCTGATATTTAACCTTTATTTCAATTAACAAAAGCCATTTTTAATAGTTTTAGTTAGACAACACTAAACGCTGATCCACTGAAGTTTCTTACAAGCTTGTTACACTTCCCTTCAGGGAAACCATGTTTTTGAATAAGGCCATTATTATACACACCAGTAATCTTAATATTTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248778 True 212 lncRNA 0.28 1 3849485 3849696

Neighbor

gene id symbol gene type direction distance location
CI01000051_03800655_03819155 ZYG11B, ZYG11 coding upstream 30288 3800655 ~ 3819197 (+)
CI01000051_03687377_03698806 ANGPTL1A, ANGPTL1 coding upstream 150522 3687324 ~ 3698963 (+)
CI01000051_03679568_03682342 NA coding upstream 166957 3679437 ~ 3682528 (+)
CI01000051_03457204_03459579 NA coding upstream 389561 3456959 ~ 3459924 (+)
CI01000051_03443548_03451188 NA coding upstream 397671 3443548 ~ 3451814 (+)
CI01000051_04038453_04045552 TMEM30A, TMEM30AA, TMEM30AB coding downstream 188711 4038407 ~ 4046528 (+)
CI01000051_04071144_04075444 KCNK13B coding downstream 221448 4070951 ~ 4077125 (+)
CI01000051_04081532_04085798 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding downstream 231836 4081532 ~ 4085922 (+)
CI01000051_04094412_04101387 CALM2, CALM3, CALM1 coding downstream 244658 4094354 ~ 4101516 (+)
CI01000051_04155754_04157992 NFKBIAA coding downstream 305988 4155684 ~ 4158329 (+)
G219324 NA non-coding upstream 3275 3845967 ~ 3846210 (+)
G219323 NA non-coding upstream 4180 3845038 ~ 3845305 (+)
G219322 NA non-coding upstream 4559 3844722 ~ 3844926 (+)
G219318 NA non-coding upstream 10008 3839185 ~ 3839477 (+)
G219316 NA non-coding upstream 13981 3835288 ~ 3835504 (+)
G219330 NA non-coding downstream 755 3850451 ~ 3850720 (+)
G219336 NA non-coding downstream 7234 3856930 ~ 3857268 (+)
G219354 NA non-coding downstream 65090 3914786 ~ 3915288 (+)
G219357 NA non-coding downstream 68340 3918036 ~ 3918837 (+)
G219294 NA non-coding downstream 73657 3923353 ~ 3923705 (+)
G218981 NA other upstream 602612 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 1783402 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 3124781 637590 ~ 720669 (+)
G217075 NA other upstream 3465357 324465 ~ 384128 (+)
CI01000051_04374052_04393328 NA other downstream 524714 4372658 ~ 4393677 (+)
G219803 NA other downstream 1065278 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 2976103 6825895 ~ 6830637 (+)
G221319 NA other downstream 3492345 7342041 ~ 7342546 (+)
G221386 NA other downstream 3559827 7401175 ~ 7413007 (+)

Expression


Co-expression Network