Gene
RNA
| Item | Value |
|---|---|
| gene id | G219330 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 3850451 ~ 3850720 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU248780 | True | 270 | lncRNA | 0.31 | 1 | 3850451 | 3850720 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_03800655_03819155 | ZYG11B, ZYG11 | coding | upstream | 31254 | 3800655 ~ 3819197 (+) |
| CI01000051_03687377_03698806 | ANGPTL1A, ANGPTL1 | coding | upstream | 151488 | 3687324 ~ 3698963 (+) |
| CI01000051_03679568_03682342 | NA | coding | upstream | 167923 | 3679437 ~ 3682528 (+) |
| CI01000051_03457204_03459579 | NA | coding | upstream | 390527 | 3456959 ~ 3459924 (+) |
| CI01000051_03443548_03451188 | NA | coding | upstream | 398637 | 3443548 ~ 3451814 (+) |
| CI01000051_04038453_04045552 | TMEM30A, TMEM30AA, TMEM30AB | coding | downstream | 187687 | 4038407 ~ 4046528 (+) |
| CI01000051_04071144_04075444 | KCNK13B | coding | downstream | 220424 | 4070951 ~ 4077125 (+) |
| CI01000051_04081532_04085798 | PSMC1B, PSMC1, PSMC1A, PSMC1.L | coding | downstream | 230812 | 4081532 ~ 4085922 (+) |
| CI01000051_04094412_04101387 | CALM2, CALM3, CALM1 | coding | downstream | 243634 | 4094354 ~ 4101516 (+) |
| CI01000051_04155754_04157992 | NFKBIAA | coding | downstream | 304964 | 4155684 ~ 4158329 (+) |
| G219328 | NA | non-coding | upstream | 755 | 3849485 ~ 3849696 (+) |
| G219324 | NA | non-coding | upstream | 4241 | 3845967 ~ 3846210 (+) |
| G219323 | NA | non-coding | upstream | 5146 | 3845038 ~ 3845305 (+) |
| G219322 | NA | non-coding | upstream | 5525 | 3844722 ~ 3844926 (+) |
| G219318 | NA | non-coding | upstream | 10974 | 3839185 ~ 3839477 (+) |
| G219336 | NA | non-coding | downstream | 6210 | 3856930 ~ 3857268 (+) |
| G219354 | NA | non-coding | downstream | 64066 | 3914786 ~ 3915288 (+) |
| G219357 | NA | non-coding | downstream | 67316 | 3918036 ~ 3918837 (+) |
| G219294 | NA | non-coding | downstream | 72633 | 3923353 ~ 3923705 (+) |
| G219365 | NA | non-coding | downstream | 99125 | 3949845 ~ 3950059 (+) |
| G218981 | NA | other | upstream | 603578 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 1784368 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 3125747 | 637590 ~ 720669 (+) |
| G217075 | NA | other | upstream | 3466323 | 324465 ~ 384128 (+) |
| CI01000051_04374052_04393328 | NA | other | downstream | 523690 | 4372658 ~ 4393677 (+) |
| G219803 | NA | other | downstream | 1064254 | 4914974 ~ 5052033 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 2975079 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 3491321 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 3558803 | 7401175 ~ 7413007 (+) |
