Gene
RNA
| Item | Value |
|---|---|
| gene id | G219357 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 3918036 ~ 3918837 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU248807 | True | 802 | lncRNA | 0.33 | 1 | 3918036 | 3918837 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_03800655_03819155 | ZYG11B, ZYG11 | coding | upstream | 98839 | 3800655 ~ 3819197 (+) |
| CI01000051_03687377_03698806 | ANGPTL1A, ANGPTL1 | coding | upstream | 219073 | 3687324 ~ 3698963 (+) |
| CI01000051_03679568_03682342 | NA | coding | upstream | 235508 | 3679437 ~ 3682528 (+) |
| CI01000051_03457204_03459579 | NA | coding | upstream | 458112 | 3456959 ~ 3459924 (+) |
| CI01000051_03443548_03451188 | NA | coding | upstream | 466222 | 3443548 ~ 3451814 (+) |
| CI01000051_04038453_04045552 | TMEM30A, TMEM30AA, TMEM30AB | coding | downstream | 119570 | 4038407 ~ 4046528 (+) |
| CI01000051_04071144_04075444 | KCNK13B | coding | downstream | 152307 | 4070951 ~ 4077125 (+) |
| CI01000051_04081532_04085798 | PSMC1B, PSMC1, PSMC1A, PSMC1.L | coding | downstream | 162695 | 4081532 ~ 4085922 (+) |
| CI01000051_04094412_04101387 | CALM2, CALM3, CALM1 | coding | downstream | 175517 | 4094354 ~ 4101516 (+) |
| CI01000051_04155754_04157992 | NFKBIAA | coding | downstream | 236847 | 4155684 ~ 4158329 (+) |
| G219354 | NA | non-coding | upstream | 2748 | 3914786 ~ 3915288 (+) |
| G219336 | NA | non-coding | upstream | 60768 | 3856930 ~ 3857268 (+) |
| G219330 | NA | non-coding | upstream | 67316 | 3850451 ~ 3850720 (+) |
| G219328 | NA | non-coding | upstream | 68340 | 3849485 ~ 3849696 (+) |
| G219324 | NA | non-coding | upstream | 71826 | 3845967 ~ 3846210 (+) |
| G219294 | NA | non-coding | downstream | 4516 | 3923353 ~ 3923705 (+) |
| G219365 | NA | non-coding | downstream | 31008 | 3949845 ~ 3950059 (+) |
| G219366 | NA | non-coding | downstream | 31599 | 3950436 ~ 3950665 (+) |
| G219289 | NA | non-coding | downstream | 32665 | 3951502 ~ 3958033 (+) |
| G219293 | NA | non-coding | downstream | 34512 | 3953349 ~ 3955632 (+) |
| G218981 | NA | other | upstream | 671163 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 1851953 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 3193332 | 637590 ~ 720669 (+) |
| G217075 | NA | other | upstream | 3533908 | 324465 ~ 384128 (+) |
| CI01000051_04374052_04393328 | NA | other | downstream | 455573 | 4372658 ~ 4393677 (+) |
| G219803 | NA | other | downstream | 996137 | 4914974 ~ 5052033 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 2906962 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 3423204 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 3490686 | 7401175 ~ 7413007 (+) |
