Gene
RNA
| Item | Value |
|---|---|
| gene id | G219366 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 3950436 ~ 3950665 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU248817 | True | 230 | lncRNA | 0.35 | 1 | 3950436 | 3950665 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_03800655_03819155 | ZYG11B, ZYG11 | coding | upstream | 131239 | 3800655 ~ 3819197 (+) |
| CI01000051_03687377_03698806 | ANGPTL1A, ANGPTL1 | coding | upstream | 251473 | 3687324 ~ 3698963 (+) |
| CI01000051_03679568_03682342 | NA | coding | upstream | 267908 | 3679437 ~ 3682528 (+) |
| CI01000051_03457204_03459579 | NA | coding | upstream | 490512 | 3456959 ~ 3459924 (+) |
| CI01000051_03443548_03451188 | NA | coding | upstream | 498622 | 3443548 ~ 3451814 (+) |
| CI01000051_04038453_04045552 | TMEM30A, TMEM30AA, TMEM30AB | coding | downstream | 87742 | 4038407 ~ 4046528 (+) |
| CI01000051_04071144_04075444 | KCNK13B | coding | downstream | 120479 | 4070951 ~ 4077125 (+) |
| CI01000051_04081532_04085798 | PSMC1B, PSMC1, PSMC1A, PSMC1.L | coding | downstream | 130867 | 4081532 ~ 4085922 (+) |
| CI01000051_04094412_04101387 | CALM2, CALM3, CALM1 | coding | downstream | 143689 | 4094354 ~ 4101516 (+) |
| CI01000051_04155754_04157992 | NFKBIAA | coding | downstream | 205019 | 4155684 ~ 4158329 (+) |
| G219365 | NA | non-coding | upstream | 377 | 3949845 ~ 3950059 (+) |
| G219294 | NA | non-coding | upstream | 26731 | 3923353 ~ 3923705 (+) |
| G219357 | NA | non-coding | upstream | 31599 | 3918036 ~ 3918837 (+) |
| G219354 | NA | non-coding | upstream | 35148 | 3914786 ~ 3915288 (+) |
| G219336 | NA | non-coding | upstream | 93168 | 3856930 ~ 3857268 (+) |
| G219289 | NA | non-coding | downstream | 837 | 3951502 ~ 3958033 (+) |
| G219293 | NA | non-coding | downstream | 2684 | 3953349 ~ 3955632 (+) |
| G219405 | NA | non-coding | downstream | 54149 | 4004814 ~ 4005027 (+) |
| G219409 | NA | non-coding | downstream | 59514 | 4010179 ~ 4010415 (+) |
| G219414 | NA | non-coding | downstream | 63350 | 4014015 ~ 4014231 (+) |
| G218981 | NA | other | upstream | 703563 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 1884353 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 3225732 | 637590 ~ 720669 (+) |
| G217075 | NA | other | upstream | 3566308 | 324465 ~ 384128 (+) |
| CI01000051_04374052_04393328 | NA | other | downstream | 423745 | 4372658 ~ 4393677 (+) |
| G219803 | NA | other | downstream | 964309 | 4914974 ~ 5052033 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 2875134 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 3391376 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 3458858 | 7401175 ~ 7413007 (+) |
