Gene
RNA
| Item | Value |
|---|---|
| gene id | G219414 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 4014015 ~ 4014231 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU248865 | True | 217 | lncRNA | 0.29 | 1 | 4014015 | 4014231 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_03800655_03819155 | ZYG11B, ZYG11 | coding | upstream | 194818 | 3800655 ~ 3819197 (+) |
| CI01000051_03687377_03698806 | ANGPTL1A, ANGPTL1 | coding | upstream | 315052 | 3687324 ~ 3698963 (+) |
| CI01000051_03679568_03682342 | NA | coding | upstream | 331487 | 3679437 ~ 3682528 (+) |
| CI01000051_03457204_03459579 | NA | coding | upstream | 554091 | 3456959 ~ 3459924 (+) |
| CI01000051_03443548_03451188 | NA | coding | upstream | 562201 | 3443548 ~ 3451814 (+) |
| CI01000051_04038453_04045552 | TMEM30A, TMEM30AA, TMEM30AB | coding | downstream | 24176 | 4038407 ~ 4046528 (+) |
| CI01000051_04071144_04075444 | KCNK13B | coding | downstream | 56913 | 4070951 ~ 4077125 (+) |
| CI01000051_04081532_04085798 | PSMC1B, PSMC1, PSMC1A, PSMC1.L | coding | downstream | 67301 | 4081532 ~ 4085922 (+) |
| CI01000051_04094412_04101387 | CALM2, CALM3, CALM1 | coding | downstream | 80123 | 4094354 ~ 4101516 (+) |
| CI01000051_04155754_04157992 | NFKBIAA | coding | downstream | 141453 | 4155684 ~ 4158329 (+) |
| G219409 | NA | non-coding | upstream | 3600 | 4010179 ~ 4010415 (+) |
| G219405 | NA | non-coding | upstream | 8988 | 4004814 ~ 4005027 (+) |
| G219289 | NA | non-coding | upstream | 55982 | 3951502 ~ 3958033 (+) |
| G219293 | NA | non-coding | upstream | 58383 | 3953349 ~ 3955632 (+) |
| G219366 | NA | non-coding | upstream | 63350 | 3950436 ~ 3950665 (+) |
| G219428 | NA | non-coding | downstream | 12595 | 4026826 ~ 4027033 (+) |
| G219429 | NA | non-coding | downstream | 13591 | 4027822 ~ 4028047 (+) |
| G219431 | NA | non-coding | downstream | 15508 | 4029739 ~ 4029945 (+) |
| G219434 | NA | non-coding | downstream | 18248 | 4032479 ~ 4032755 (+) |
| G219438 | NA | non-coding | downstream | 36864 | 4051095 ~ 4051643 (+) |
| G218981 | NA | other | upstream | 767142 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 1947932 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 3289311 | 637590 ~ 720669 (+) |
| G217075 | NA | other | upstream | 3629887 | 324465 ~ 384128 (+) |
| CI01000051_04374052_04393328 | NA | other | downstream | 360179 | 4372658 ~ 4393677 (+) |
| G219803 | NA | other | downstream | 900743 | 4914974 ~ 5052033 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 2811568 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 3327810 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 3395292 | 7401175 ~ 7413007 (+) |
