Gene
RNA
| Item | Value |
|---|---|
| gene id | G219439 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 4055112 ~ 4055966 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU248897 | True | 855 | lncRNA | 0.32 | 1 | 4055112 | 4055966 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_04038453_04045552 | TMEM30A, TMEM30AA, TMEM30AB | coding | upstream | 8584 | 4038407 ~ 4046528 (+) |
| CI01000051_03800655_03819155 | ZYG11B, ZYG11 | coding | upstream | 235915 | 3800655 ~ 3819197 (+) |
| CI01000051_03687377_03698806 | ANGPTL1A, ANGPTL1 | coding | upstream | 356149 | 3687324 ~ 3698963 (+) |
| CI01000051_03679568_03682342 | NA | coding | upstream | 372584 | 3679437 ~ 3682528 (+) |
| CI01000051_03457204_03459579 | NA | coding | upstream | 595188 | 3456959 ~ 3459924 (+) |
| CI01000051_04071144_04075444 | KCNK13B | coding | downstream | 15178 | 4070951 ~ 4077125 (+) |
| CI01000051_04081532_04085798 | PSMC1B, PSMC1, PSMC1A, PSMC1.L | coding | downstream | 25566 | 4081532 ~ 4085922 (+) |
| CI01000051_04094412_04101387 | CALM2, CALM3, CALM1 | coding | downstream | 38388 | 4094354 ~ 4101516 (+) |
| CI01000051_04155754_04157992 | NFKBIAA | coding | downstream | 99718 | 4155684 ~ 4158329 (+) |
| CI01000051_04374052_04393328 | NA | coding | downstream | 316692 | 4372658 ~ 4393677 (+) |
| G219438 | NA | non-coding | upstream | 3469 | 4051095 ~ 4051643 (+) |
| G219434 | NA | non-coding | upstream | 22357 | 4032479 ~ 4032755 (+) |
| G219431 | NA | non-coding | upstream | 25167 | 4029739 ~ 4029945 (+) |
| G219429 | NA | non-coding | upstream | 27065 | 4027822 ~ 4028047 (+) |
| G219428 | NA | non-coding | upstream | 28079 | 4026826 ~ 4027033 (+) |
| G219440 | NA | non-coding | downstream | 233 | 4056199 ~ 4056441 (+) |
| G219451 | NA | non-coding | downstream | 7288 | 4063254 ~ 4063453 (+) |
| G219452 | NA | non-coding | downstream | 8435 | 4064401 ~ 4064853 (+) |
| G219468 | NA | non-coding | downstream | 66582 | 4122548 ~ 4122937 (+) |
| G218981 | NA | other | upstream | 808239 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 1989029 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 3330408 | 637590 ~ 720669 (+) |
| G217075 | NA | other | upstream | 3670984 | 324465 ~ 384128 (+) |
| G219803 | NA | other | downstream | 859008 | 4914974 ~ 5052033 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 2769833 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 3286075 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 3353557 | 7401175 ~ 7413007 (+) |
