G219452



Basic Information


Item Value
gene id G219452
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 4064401 ~ 4064853 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU248911
GTTAGTTTTAAAGTAAACAACAGTATAATGTTTGCGAATGACTCATAATTGTATCCTAATTTAGTTACTTGGTGTTTGGTAACGAAGGGCCTACTTTGCATCAGCAACACTGACTCAATGACAAAGAAGTCATTCATAAGAAGACAACTGATGGCACCTGTATTCATAGCAACTAGTTTCTAACTAATTAATCATTTGATTGTTAATCATAAATATAGGGGGGGCTGCTGCTCGGTATAATAGTTTTCAAGAACACTATGTAAATTGGTAAACTATTTAGCCTAGGCTACCAAAACGAACACCAAAACTTAACATGAACTGTTAAAAATTATAGCGATTTATGCAAAAAAATTGATGGAAAGCTGGCAGCCTGCACGTTTCTTGACCACCTTCTTCCATATGGATCTGTTCTGATCGCAACAAGTCTCTGCAAACTACTGAGTAAGCACCAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU248911 True 453 lncRNA 0.36 1 4064401 4064853

Neighbor


gene id symbol gene type direction distance location
CI01000051_04038453_04045552 TMEM30A, TMEM30AA, TMEM30AB coding upstream 17873 4038407 ~ 4046528 (+)
CI01000051_03800655_03819155 ZYG11B, ZYG11 coding upstream 245204 3800655 ~ 3819197 (+)
CI01000051_03687377_03698806 ANGPTL1A, ANGPTL1 coding upstream 365438 3687324 ~ 3698963 (+)
CI01000051_03679568_03682342 NA coding upstream 381873 3679437 ~ 3682528 (+)
CI01000051_03457204_03459579 NA coding upstream 604477 3456959 ~ 3459924 (+)
CI01000051_04071144_04075444 KCNK13B coding downstream 6291 4070951 ~ 4077125 (+)
CI01000051_04081532_04085798 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding downstream 16679 4081532 ~ 4085922 (+)
CI01000051_04094412_04101387 CALM2, CALM3, CALM1 coding downstream 29501 4094354 ~ 4101516 (+)
CI01000051_04155754_04157992 NFKBIAA coding downstream 90831 4155684 ~ 4158329 (+)
CI01000051_04374052_04393328 NA coding downstream 307805 4372658 ~ 4393677 (+)
G219451 NA non-coding upstream 948 4063254 ~ 4063453 (+)
G219440 NA non-coding upstream 7960 4056199 ~ 4056441 (+)
G219439 NA non-coding upstream 8435 4055112 ~ 4055966 (+)
G219438 NA non-coding upstream 12758 4051095 ~ 4051643 (+)
G219434 NA non-coding upstream 31646 4032479 ~ 4032755 (+)
G219468 NA non-coding downstream 57695 4122548 ~ 4122937 (+)
G219481 NA non-coding downstream 86610 4151463 ~ 4151765 (+)
G219484 NA non-coding downstream 89589 4154442 ~ 4154766 (+)
G219497 NA non-coding downstream 131674 4196527 ~ 4197145 (+)
G218981 NA other upstream 817528 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 1998318 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 3339697 637590 ~ 720669 (+)
G217075 NA other upstream 3680273 324465 ~ 384128 (+)
G219803 NA other downstream 850121 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 2760946 6825895 ~ 6830637 (+)
G221319 NA other downstream 3277188 7342041 ~ 7342546 (+)
G221386 NA other downstream 3344670 7401175 ~ 7413007 (+)

Expression



Co-expression Network