Gene
RNA
| Item | Value |
|---|---|
| gene id | G219552 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 4256760 ~ 4256981 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU249024 | True | 222 | lncRNA | 0.39 | 1 | 4256760 | 4256981 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_04155754_04157992 | NFKBIAA | coding | upstream | 98431 | 4155684 ~ 4158329 (+) |
| CI01000051_04094412_04101387 | CALM2, CALM3, CALM1 | coding | upstream | 155244 | 4094354 ~ 4101516 (+) |
| CI01000051_04081532_04085798 | PSMC1B, PSMC1, PSMC1A, PSMC1.L | coding | upstream | 170838 | 4081532 ~ 4085922 (+) |
| CI01000051_04071144_04075444 | KCNK13B | coding | upstream | 179635 | 4070951 ~ 4077125 (+) |
| CI01000051_04038453_04045552 | TMEM30A, TMEM30AA, TMEM30AB | coding | upstream | 210232 | 4038407 ~ 4046528 (+) |
| CI01000051_04374052_04393328 | NA | coding | downstream | 115677 | 4372658 ~ 4393677 (+) |
| CI01000051_04419475_04464134 | NA | coding | downstream | 162289 | 4419270 ~ 4464166 (+) |
| CI01000051_04763063_04778692 | NA | coding | downstream | 505515 | 4762496 ~ 4779082 (+) |
| CI01000051_04796878_04799272 | FLRT2 | coding | downstream | 539897 | 4796878 ~ 4799321 (+) |
| CI01000051_05072860_05074568 | GLRX5 | coding | downstream | 815648 | 5072629 ~ 5074874 (+) |
| G219547 | NA | non-coding | upstream | 6675 | 4249866 ~ 4250085 (+) |
| G219543 | NA | non-coding | upstream | 8941 | 4247618 ~ 4247819 (+) |
| G219539 | NA | non-coding | upstream | 10911 | 4245178 ~ 4245849 (+) |
| G219534 | NA | non-coding | upstream | 19643 | 4236696 ~ 4237117 (+) |
| G219497 | NA | non-coding | upstream | 59615 | 4196527 ~ 4197145 (+) |
| G219559 | NA | non-coding | downstream | 20439 | 4277420 ~ 4278285 (+) |
| G219563 | NA | non-coding | downstream | 30106 | 4287087 ~ 4287400 (+) |
| G219564 | NA | non-coding | downstream | 34668 | 4291649 ~ 4291855 (+) |
| G219580 | NA | non-coding | downstream | 75841 | 4332822 ~ 4333037 (+) |
| G219581 | NA | non-coding | downstream | 82932 | 4339913 ~ 4340113 (+) |
| G218981 | NA | other | upstream | 1009887 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 2190677 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 3532056 | 637590 ~ 720669 (+) |
| G217075 | NA | other | upstream | 3872632 | 324465 ~ 384128 (+) |
| G219803 | NA | other | downstream | 657993 | 4914974 ~ 5052033 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 2568818 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 3085060 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 3152542 | 7401175 ~ 7413007 (+) |
